| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJJ81176_1692 |
|---|
| Symbol | rplE |
|---|
| ID | 4682447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008787 |
|---|
| Strand | - |
|---|
| Start bp | 1589237 |
|---|
| End bp | 1589782 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 639854419 |
|---|
| Product | 50S ribosomal protein L5 |
|---|
| Protein accession | YP_001001339 |
|---|
| Protein GI | 121613307 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0094] Ribosomal protein L5 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0046073 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAGAT TAAAAGAAAA ATATAATCAA AGCATTAAAC CTGCATTGGT TAAAGAATTT
GATATTAAAA ATCCTATGCT TATCCCTGTG ATCGAAAAAG TAGTTATCAG CGTAGGTGCT
GGTGAGTTGG CTAAAGATCA AAAAGTATTG CAAAATGTTG CAGATACTAT TTCTTTAATT
GCAGGACAAA AGGCTGTGAT TACTAAAGCT AAAAAATCAG TTGCAGGATT TAAAGTTCGC
GAAGGTTTTC CTGTGGGTGT AATGGTAACT TTAAGAAAAG AAAATATGTA TGCTTTTCTT
GATAAATTAA TTTCTATTGC TTTGCCAAGG GTGAAAGACT TTAGAGGTTT AAGTAGAGAT
GGTTTTGATG GACGCGGAAA CTATAACTTC GGTCTTGATG AGCAGTTGAT GTTCCCAGAA
GTGGAGTATG ATAAAATTTT AAGAACTCAT GGTATGAACA TTTCTATAGT TACAACAGCA
CAAAATGACA AACAGGCACA AAAGTTATTA GAACTTATCG GTGTGCCATT TACAAAAGGA
AAGTAA
|
|---|
| Protein sequence | MMRLKEKYNQ SIKPALVKEF DIKNPMLIPV IEKVVISVGA GELAKDQKVL QNVADTISLI
AGQKAVITKA KKSVAGFKVR EGFPVGVMVT LRKENMYAFL DKLISIALPR VKDFRGLSRD
GFDGRGNYNF GLDEQLMFPE VEYDKILRTH GMNISIVTTA QNDKQAQKLL ELIGVPFTKG
K
|
|---|
| |