Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJJ81176_1635 |
Symbol | ispA |
ID | 4683722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
Kingdom | Bacteria |
Replicon accession | NC_008787 |
Strand | + |
Start bp | 1544884 |
End bp | 1545729 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 639854362 |
Product | geranyltranstransferase |
Protein accession | YP_001001287 |
Protein GI | 121613596 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATTTAA AAGAACTTTT TATCCATCAC TTAGAAAAAA ATCTACCTAA AGTCGAAAGC TTTCATCCTT TTTTTAATGA AGCTTTAGCT CTTATGCTAA AAGCAGGAGG AAAGCATTTT CGTGCACAAT TGCTTTTAAG CGTAGTACAA AGCAATAAAC CTGAACTTTT AAATCAAGCT TTAGATGTGG CTTTAGCTTT GGAATTTATC CATACTTATT CACTCATACA CGATGATTTA CCCGCTATGG ATAATGCGGA TTTTAGACGA GGAATTCCAA CCTTACACAA AAGCTACGAT GAAACTACAG CCATCTTAGT GGGCGATGCT TTAAATACTG AAGCTTTTTT AGTTCTAAGC CATGCTCATT TAAAAGATGA AATCAAAATC AAACTCATCA AAACCCTTGC CTTTAATGCA GGACTTAATG GAATGGTCAT AGGACAAGCT ATTGATTGTT TTTTTGAAGA CAAAAAACTG AGTTTAAATG AACTTGAGTT TTTACACACA CATAAAACCG CAAGATTAAT CGCTGCAGCT TTAAAAATGG GTTGTGAAAT TTGCGAACTT AACAACGAAG AAAGCAATCA AATTTACAAA CTTGGTTTGA AATTAGGACT GATTTTTCAA ATCAATGATG ATATTATCGA TGTAACCACA AGTCAAGAAC AAAGCGGAAA GCCTACTAAT AACGATATTC ATAAAAATTC TTTTGTCAAT TTGCTTGGAC TTGAACAAGC TATAAAAACA AAAGAAAATC TTCTTAGTGA ATGCGAACAA GATTTAGAAA AACTCAATAA AAAACTCGCA CAAATGATAC AAAATTTAAT AATTCAATAC TTATAA
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Protein sequence | MNLKELFIHH LEKNLPKVES FHPFFNEALA LMLKAGGKHF RAQLLLSVVQ SNKPELLNQA LDVALALEFI HTYSLIHDDL PAMDNADFRR GIPTLHKSYD ETTAILVGDA LNTEAFLVLS HAHLKDEIKI KLIKTLAFNA GLNGMVIGQA IDCFFEDKKL SLNELEFLHT HKTARLIAAA LKMGCEICEL NNEESNQIYK LGLKLGLIFQ INDDIIDVTT SQEQSGKPTN NDIHKNSFVN LLGLEQAIKT KENLLSECEQ DLEKLNKKLA QMIQNLIIQY L
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