Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJJ81176_1576 |
Symbol | |
ID | 4683172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
Kingdom | Bacteria |
Replicon accession | NC_008787 |
Strand | - |
Start bp | 1496307 |
End bp | 1497602 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 639854302 |
Product | proline/betaine transporter, putative, authentic frameshift |
Protein accession | YP_001001231 |
Protein GI | 121613612 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAAT CAAAATTTGG AACAAAGGAA ATTAAGATCT TAGGACTTTC TTCACTAGGA GGAACTTTAG AATTTTATGA TTTTATTATT TTTGTCTTTT TTGCTGAATA TATAGCTAAT GTATTTTTTC CTAAAGATAT GAGTGAATTT TGGGCTTTAT TAAATACTTA TGGAGCATTT GCAGCTGGAT ATTTAGCACG TCCTTTAGGT GGTATAGTTA TGGCACATTT TGGAGATAAA TTTGGGCGTA ACAATATGTT TATGCTAAGT ATTTTACTAA TGGTTCTTCC TACCTTTGTC TTAGCTTTTA TTCCAGGTTA TGAAACTCTT GGGTTTTTAG CTCCTGTTTT ATTGATACTT ATAAGAATTT TTCAAGGCAT AGCTATAGGT GGAGAATTGC CTGGAGCTTG GGTTTTTGTA AGAGAACATT GTCAAGAAAA ACAAAAAGCT TTCTTTTTAA GCTGTTTAAA TTCAGCTATG GCTTTAGGAA TTTTGTTAGG AAGTATAGTA TTTTTAATCA TTAATGCTTT TTTTAGTATA GAAGAAATTG CTGCTTATGC ATGGCGTATT GCTTTTTTTG TAGGTGGAAT TTTTGGGATT ATTTCTATTT ATTTGCGTAG ATTTTTGCAA GAAACTCCTG TTTTTAAACA AATGAAAAAA GAATCATCAC TTAGTTCTTT TCCACTTAGA GATTTATTTA AAGAAAAGGA TATTGTAAAA AATTTATTTT CATCAATGAT GATGACTTGG GTTTTAACAG GTTGTGTTAT TGTGCTTGTT TTATTAATGC CTAAATTTAT GCCTAGTATT TTAAATTTAA GTGGGGTTGA AGGAAGTTAT TTACAGGTAT TAGGAATTTT GGGAATAGCT TTAGGCGGGG CTTTTATGGG TTATCTTGTA GATAAATTTG GTTTATTTAA AATTTGCATT TTCTTTTCTT TAACTTTTGT ATTTTTTTCT TTTTTATATT TTTATGCTTT ATACGAGCTT AAAAATTTGG TTTTGGTGTG TATTTTGTAT TCGATTGTTT GTTTTTTAGG TGGGATTAAT GTGTTTGCAC CTATTTTAAT GAGTGAAGTT TTTAGAGCTA AAATAAGATT TTCAGGAATT TCTTTTTCTT ATAATATTGC TTATGCAATT TCAGGCGGTA TTACTCCGCA ACTCGTTTTT TGGCTTAATA CACTCGCGAG TAAAAATGAA AATCCATTTT TATATGGTAT GAGTATATAT ATGATTTTTT TAGCATTATT GGCTATTTGT GCTGTTTTTA TAGTAAAAGA TAAAATAAAA TTTTGA
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Protein sequence | MRKSKFGTKE IKILGLSSLG GTLEFYDFII FVFFAEYIAN VFFPKDMSEF WALLNTYGAF AAGYLARPLG GIVMAHFGDK FGRNNMFMLS ILLMVLPTFV LAFIPGYETL GFLAPVLLIL IRIFQGIAIG GELPGAWVFV REHCQEKQKA FFLSCLNSAM ALGILLGSIV FLIINAFFSI EEIAAYAWRI AFFVGGIFGI ISIYLRRFLQ ETPVFKQMKK ESSLSSFPLR DLFKEKDIVK NLFSSMMMTW VLTGCVIVLV LLMPKFMPSI LNLSGVEGSY LQVLGILGIA LGGAFMGYLV DKFGLFKICI FFSLTFVFFS FLYFYALYEL KNLVLVCILY SIVCFLGGIN VFAPILMSEV FRAKIRFSGI SFSYNIAYAI SGGITPQLVF WLNTLASKNE NPFLYGMSIY MIFLALLAIC AVFIVKDKIK F
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