| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJJ81176_1450 |
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| Symbol | truD |
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| ID | 4683064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008787 |
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| Strand | - |
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| Start bp | 1372383 |
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| End bp | 1373501 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 639854176 |
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| Product | tRNA pseudouridine synthase D |
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| Protein accession | YP_001001106 |
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| Protein GI | 121612519 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTAG AGGAAGAGAA CACCATTTTT AAGCCTTTGT ATAGTTTAAA ACACAGTCCT
ATTAATGCGT ATTTTAGTAA AAATAGCGAT GATTTTGTAG TGCGTGAAAG GCCTTTGTAT
GAATTTAGCG GTAAGGGTGA ACATCTTATT TTGCATATCA ATAAAAAAGA TTTAACCACA
AATGAAGCTT TAAAAATTTT AAGCGAAACA AGCGGGGTTA AAATAAGAGA TTTTGGTTAT
GCAGGGCTTA AAGATAAGCA AGGATCAACC TTTCAATACC TTTCTATGCC TAAAAAATTT
GAGAGTTTTT TGTCAAATTT TTCTCATCCT AAACTTAAAA TTTTAGAAAT TTTTACCCAT
GAAAACAAGC TAAGAATAGG GCATTTAAAA GGAAATACTT TTTTCATACG CTTAAAAAAA
GTTTTACCAA GCGATGCTTT AAAACTAGAA CAAGCTTTGA TGAATTTGGA TAAGCAAGGT
TTTACGAATT ATTTTGGTTA TCAGCGTTTT GGAAAATTTG GGGATAATTA TAAAGAAGGG
CTTGAAATTT TGCATGGCAA AAAAATGAAA AATGTAAAAA TGAAAGAGTT TTTAATTTCA
GCTTTTCAAA GTGAGCTTTT TAATCGCTAT TTGAGTAAAA GAGTGGAGTT ATCACATTTT
GCAAATGATT TTAGCGAAAA AGAATTGATC CAAATTTATA AAATTTCTAA AGAAGAAGCT
AAGGAACTTA AAAAACAAGA ACAATTTTTT AAGCTTTTAA AAGGTGAGGT TTTAGGGCAT
TATCCTTTTG GAAAGTGTTT TTTATGCGAG GATTTAAGTG CTGAGCTTGG GCGTTTTAAG
GCAAGAGATA TAAGCGCCAT GGGGCTTTTA ATCGGTGCTA AGGCTTATGA AACAGGAGAA
GGTTTGGCCT TAAATTTAGA AAATGAAATT TTTAAAGATA CTTTGGAGTT TAAGGCTAAA
ATGCAAGGTT CAAGACGCTT TATGTGGGGA TATTTAGAAG AGTTAAAATG GCGTTATGAT
GAAGAAAAAG CTCATTTTTG TATAGAGTTT TTCTTGCAAA AAGGCTCTTA TGCTACTGTG
GTTTTAGAAG AAATTTTGCA TAAAAATTTG TTTGAATGA
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| Protein sequence | MNLEEENTIF KPLYSLKHSP INAYFSKNSD DFVVRERPLY EFSGKGEHLI LHINKKDLTT
NEALKILSET SGVKIRDFGY AGLKDKQGST FQYLSMPKKF ESFLSNFSHP KLKILEIFTH
ENKLRIGHLK GNTFFIRLKK VLPSDALKLE QALMNLDKQG FTNYFGYQRF GKFGDNYKEG
LEILHGKKMK NVKMKEFLIS AFQSELFNRY LSKRVELSHF ANDFSEKELI QIYKISKEEA
KELKKQEQFF KLLKGEVLGH YPFGKCFLCE DLSAELGRFK ARDISAMGLL IGAKAYETGE
GLALNLENEI FKDTLEFKAK MQGSRRFMWG YLEELKWRYD EEKAHFCIEF FLQKGSYATV
VLEEILHKNL FE
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