Gene CJJ81176_1392 details

Gene Information

• Locus tag: CJJ81176_1392
• Symbol: metC
• ID: 4683766
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter jejuni subsp. jejuni 81-176
• Kingdom: Bacteria
• Replicon accession: NC_008787
• Strand: +
• Start bp: 1314764
• End bp: 1315927
• Gene Length: 1164 bp
• Protein Length: 387 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 639854118
• Product: cystathionine beta-lyase
• Protein accession: YP_001001048
• Protein GI: 121612883
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases
• TIGRFAM ID: [TIGR01324] cystathionine beta-lyase, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.000072786
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTCAA AAACTAAACT TATTCATTGT GGCAGAGGCG ATCAAGGCGC TGAAGTAAGA 
TCAGTCAATC CTACACTTAT GCGTGCATCA ACCATACTTT TTAAAGATCA CGCAACTTGG 
CAAAAATACA GAGAATTAAG AAAAACAGAT CGTGTTTTAA GCTATGGGGC TAGAGGAACA 
ACAACCAATT TTGAACTTGA AAAACTTATT TGCACTCTAG AGGGTGGTTA TAGAGCACAA 
CTTTTCCCAA CAGGACTTGC AGCATTAGCT ATGGTGCTTT TAAACTATGC AAGCAAAGAT 
GCGCATTTTT TAATCACCGA TGCAATTTAT GGTCCTGTAA GAACGATTTG CGAATTATTT 
TTAGAAAAAA TGGGTGTTGA AATTGATTTT TTAAAAGCTG ATGCAAGTGA TGTAGAAGAA 
AAAATCAAAC CTAATACCAA GCTTATCCTA TGTGAAAGTC CAGGTTCTAT ACTTTATGAA 
ATCATAGATT TACCAAAACT TTGCAAAATT GCCCATGCGC ATAATATCCC TGTAGCTATT 
GACAATACTT ATTCTAGTGG ATATTTTCTA AATCCTTTAG AACTTGGAGT GGATATTTCA 
GTTATCGCCG CTACAAAATA TCTTAGCGGA CACTCTGATG TAACCATGGG TATAGTAGTA 
ATCAACGAAA AAGAATGGAA AAATTTTGAC AAACTTCCAG AAGCTTTAGG CTTTACAACA 
AGTCCTGATG ATGCTTACTT AGTACTTCGT GGTATGAGAA CACTAGATGT AAGAATGAAA 
GCTCATGAAA AAAGTGCTGA TGAAATTGTA GAGTTTTTAC AAAGCAGAAA AGAAATTAAA 
ACAATTTTCT ATCCAAAACT CAAATCCCAC CCAAATCATG AAATTTTCAT GCGTGATCAT 
AAAGGTGCAA ATGGTATGAT TACCATAGAA TTTGCAGAAG GTTATAGCAA AGATGATGCT 
ATTAAATTTG TAGATAAACT AGAATACTTT TCAATTGGTG CTAGCTGGGG TGGATATGAA 
AGCTTAGCCA CCGTAACTAC TCCACCTAGA ACTGCAACAG ATTGGAGTGC AAGAGGACCA 
TTTGTAAGAT TTCATATAGG TCTTGAAGAT ACTAAAGATT TAATTGCTGA TTTAACACAA 
GCTTTTGATA GTATTAAAAA ATAA 

 

Protein sequence

MNSKTKLIHC GRGDQGAEVR SVNPTLMRAS TILFKDHATW QKYRELRKTD RVLSYGARGT 
TTNFELEKLI CTLEGGYRAQ LFPTGLAALA MVLLNYASKD AHFLITDAIY GPVRTICELF 
LEKMGVEIDF LKADASDVEE KIKPNTKLIL CESPGSILYE IIDLPKLCKI AHAHNIPVAI 
DNTYSSGYFL NPLELGVDIS VIAATKYLSG HSDVTMGIVV INEKEWKNFD KLPEALGFTT 
SPDDAYLVLR GMRTLDVRMK AHEKSADEIV EFLQSRKEIK TIFYPKLKSH PNHEIFMRDH 
KGANGMITIE FAEGYSKDDA IKFVDKLEYF SIGASWGGYE SLATVTTPPR TATDWSARGP 
FVRFHIGLED TKDLIADLTQ AFDSIKK