Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJJ81176_1275 |
Symbol | porA |
ID | 4683701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
Kingdom | Bacteria |
Replicon accession | NC_008787 |
Strand | + |
Start bp | 1190777 |
End bp | 1192051 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639854002 |
Product | major outer membrane protein |
Protein accession | YP_001000935 |
Protein GI | 121612668 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000233206 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTAG TTAAACTTAG TTTAGTTGCA GCTCTTGCTG CAGGTGCTTT TTCAGCAGCT AACGCTACTC CACTTGAAGA AGCGATCAAA GATGTTGATG TATCAGGTGT ATTAAGATAC AGATACGATA CAGGTAATTT TGATAAAAAT TTCGTTAACA ACTCAAATTT AAACAACAGC AAACAAGATC ACAAATATAG AGCACAAGTT AACTTCAGTG CTGCTATAGC TGATAACTTC AAAGCTTTTG TTCAATTTGA CTATAATGCT GCTGATGGTG GTTATGGTGC TAATGGAATA AAAAATGATC AAAAAGGACT TTTTGTTCGT CAATTATACT TAACTTATAC AAATGAAGAT GTTGCTACAA GCGTAATCGC TGGTAAACAA CAACTAAACA CTATCTGGAC TGACAATGGA GTTGATGGTT TAGTAGGAAC AGGTATCAAA GTAGTAAACA ACAGCATCGA TGGTTTAACT CTAGCTGCTT TTGCTGTAGA TAGCTTTATG GCGGAAGAGC AAGGTGCAGA TTTATTAGGA AAAAGTACTA TATCTACAAC ACAGAACGCA GTTCCTTTTC AAGCAGATTC ATTAGGAAAT CTTTACGGTG CTGCTGCTGT AGGTTCTTAT GATCTTGCTG GCGGACAATT TAATCCACAA TTATGGTTAG CTTACTGGGA TCAAGTAGCA TTCTTCTATG CTGTAGATGC AGCTTATAGT ACAACTATCT TTGATGGAAT CAACTGGACA CTTGAAGGTG CTTACTTAGG AAATAGCCTT GATAGCGAAC TTGATGATAA AAGACACGCT AATGGCAATT TATTTGCTTT AAAAGGTAGC ATTGAAGTAA ATGGTTGGGA TGCTAGCCTT GGTGGTTTAT ACTACGGTGA TAAAGAAAAA GCTTCTACAG TTGTAATCGA AGATCAAGGT AATCTTGGTT CTTTACTTGC AGGTGAGGAA ATTTTCTATA CTACTGGTTC AAGACTAAAT GGTGATACTG GTAGAAATAT CTTCGGTTAT GTAACTGGTG GATATACTTT CAACGAAACA GTTCGCGTTG GTGCTGACTT CGTATATGGT GGAACAAAAA CAGAAGCTAC TAATCATTTA GGTGGTGGTA AAAAACTTGA AGCTGTTGCA AGAGTAGATT ACAAATACTC TCCAAAACTT AACTTCTCAG CATTCTATTC TTATGTGAAC CTAGATCAAG GTGTAAACAC TAATGAAAGT GCTGATCATA GCACTGTAAG ACTTCAAGCT CTTTACAAAT TCTAA
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Protein sequence | MKLVKLSLVA ALAAGAFSAA NATPLEEAIK DVDVSGVLRY RYDTGNFDKN FVNNSNLNNS KQDHKYRAQV NFSAAIADNF KAFVQFDYNA ADGGYGANGI KNDQKGLFVR QLYLTYTNED VATSVIAGKQ QLNTIWTDNG VDGLVGTGIK VVNNSIDGLT LAAFAVDSFM AEEQGADLLG KSTISTTQNA VPFQADSLGN LYGAAAVGSY DLAGGQFNPQ LWLAYWDQVA FFYAVDAAYS TTIFDGINWT LEGAYLGNSL DSELDDKRHA NGNLFALKGS IEVNGWDASL GGLYYGDKEK ASTVVIEDQG NLGSLLAGEE IFYTTGSRLN GDTGRNIFGY VTGGYTFNET VRVGADFVYG GTKTEATNHL GGGKKLEAVA RVDYKYSPKL NFSAFYSYVN LDQGVNTNES ADHSTVRLQA LYKF
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