| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJJ81176_1111 |
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| Symbol | secD |
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| ID | 4682984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008787 |
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| Strand | - |
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| Start bp | 1028821 |
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| End bp | 1030401 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 639853837 |
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| Product | preprotein translocase subunit SecD |
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| Protein accession | YP_001000771 |
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| Protein GI | 121613290 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.789718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAATT CTAAAATCAA TTATCGCTTG ATTATTTTTA TAGCGGTATT TATTTTTGGA
GTGGCTTTTT CACTCCCTTC TTTTTTGCAG TCAGAACGTG GTGCGAAGAT TAATTTAGGG
CTTGATTTGC AAGGCGGGCT TTATATGCTC TTAGGTGTAG ATAATGAAGA AGCTGTAAAA
TCTAAAATAA AATCAATTGC ATCTTCATTG AGTTATTCTT TTAATAAAGA AAATATTTTA
AATGATGGCT TAAATACCCA TGATGATATT TTAGAATTTA CTTTGCTTGA TAATGCAGAT
ATTGCAAAAG TTGAAAATTT GCTTAAAGAA ATAAAAGGAA TTAATATACA AAGTGAAAAT
ATGCACTATA AAATTTCTTT TACCTCAGAA GAAGTAAAAA ATATAGAAAA TTTTGCACTT
TTGCAAGCAG TTGAAACCAT AAGAAATAGG CTTGATCAAT TTGGTTTAGC AGAGCCAACA
GTTGCTAAAC AAGGTGATGA TAAGATTTTG GTTGAACTTG CAGGGATTAA AACCAAAGAA
GATGAACTAA GAGCAAAAGA ACGCATCACA AAAGCAGCAC ATTTGCAACT TATGGAAGTT
GATGATTCTA AAATGGGTCA AGCTTCTACA ATGAGTGATG CTGAGGCTGC GAGTTATGGA
CTGATTTTAG TACCTGATTC TAGAAATCCA AATTTAAAAT ATACCTTAAA AAGCATACCT
ATTTTAGATG GATCTATGCT TACTGATGCT AGAGTAGGGA TTAGTGATAA GAGTAATTAT
CCTGTGATTA ATTTTACTTT AAATGCCGAG GGTTCTAAAA AATTTGCTGA TTATACAGGA
GCAAATGTTG GAAAGCGTCT TGCTATTGTA CTTGATAATA AAGTGTATTC TGCCCCATCT
ATCAATGAAC GCATAGGTGG AGGTAGTGGG CAAATCAGTG GAGCTTTTAC CCAAGAAGAA
GCGCGTGATG TGGCGGTAGC TTTAAGAAGT GGAGCTTTGC TTGCGCCTGT AAAATTACTT
GAACAAAGAA GTATAGGACC ATCTTTAGGT GCTGATAGTA TCAAAATGAG TATGATAGCC
TTAATCGGTG CATCGGTTTT TATTGTAATA TTTATGATGA TGTATTACGG TGTGGCAGGA
ATTTTTGCAA ATATTGCAAT GTTGGTTAAT GTTTTGGTAG TAGTGGCTGT TATGGCTATG
TTTGGAGCAA CTTTAACTTT ACCAGGGATG GCAGGACTTG TTTTAACTGT GGGTATGGCA
GTAGATGCAA ATGTGATTAT CAATGAGCGC ATACGAGAAC TCTTGCGAGA TGGAGTAAAT
ATAAGAGCTA GTATAGAACA AGGTTATAAA AATGCTATGA GTGCGATTAT AGATTCAAAT
ATCACTTCTT TAGTTACTTC GGTGGCACTT TATGCCTATG GAACAGGAGC AGTTAAAGGT
TTTGCTGTGA CTTTGGGAAT TGGTATCGTT GTTTCTATGA TTACAGCTAT TTTAGGAACT
CACGGAATGT TTGATTATTT TATGCAACGC ATAGAAAAAA GTAATAATAC AAGATTTTGG
TTTGGTTACA GGAGAAGATA A
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| Protein sequence | MRNSKINYRL IIFIAVFIFG VAFSLPSFLQ SERGAKINLG LDLQGGLYML LGVDNEEAVK
SKIKSIASSL SYSFNKENIL NDGLNTHDDI LEFTLLDNAD IAKVENLLKE IKGINIQSEN
MHYKISFTSE EVKNIENFAL LQAVETIRNR LDQFGLAEPT VAKQGDDKIL VELAGIKTKE
DELRAKERIT KAAHLQLMEV DDSKMGQAST MSDAEAASYG LILVPDSRNP NLKYTLKSIP
ILDGSMLTDA RVGISDKSNY PVINFTLNAE GSKKFADYTG ANVGKRLAIV LDNKVYSAPS
INERIGGGSG QISGAFTQEE ARDVAVALRS GALLAPVKLL EQRSIGPSLG ADSIKMSMIA
LIGASVFIVI FMMMYYGVAG IFANIAMLVN VLVVVAVMAM FGATLTLPGM AGLVLTVGMA
VDANVIINER IRELLRDGVN IRASIEQGYK NAMSAIIDSN ITSLVTSVAL YAYGTGAVKG
FAVTLGIGIV VSMITAILGT HGMFDYFMQR IEKSNNTRFW FGYRRR
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