| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJJ81176_1100 |
|---|
| Symbol | thiD |
|---|
| ID | 4683297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008787 |
|---|
| Strand | - |
|---|
| Start bp | 1015959 |
|---|
| End bp | 1016771 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639853826 |
|---|
| Product | phosphomethylpyrimidine kinase |
|---|
| Protein accession | YP_001000760 |
|---|
| Protein GI | 121612839 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
|---|
| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAA AAGGAAGCGA ACTTATACCT GTTTTAACTA TAGCAGGAAG CGATTGTAGT
GGTGGAGCAG GGATACAAGC CGATCTTAAA ACCTTTAGTG CGCACAATCT TTTTGGTATG
AGTGTGGTTT TAAGTGTGGT AGCTGAAAAT ACCGCAAGGG TGATTTCTGT ACACGATATA
CCTACTCAAA GCGTAGATGA ACAAATGCTT GCCGTATTTG AAGATATAGT GCCAAAGGCA
ACTAAAATCG GAATGATAGG TTCTTGTGAA TTAATGAGCT GTGTAGCTAA AAATTTAAGC
GAGTTTAAAC CTCAAAATGT AGTGATCGAT CCTGTAATGT TTGCTAAAAA TGGCTATGCT
TTAATGCCGC AAGAAAATTG TGATTTTTTC AAGCAAACCA TAGTAAAATT TGCAGATATT
CTTACGCCTA ATATTCCTGA AGCAGAGTTT TTATGCGGTT TTAAGATCGC TAATGAAGAG
CAGATGATAA AAGCAGCTAA GCATTTATGC AGCTTGGGGG CTAAGGCAGT TTTACTTAAA
GGCGGACATA GTGAAGAAAA TGCCAATGAT GTGCTTTATG ATGGAAAAGA AATTTATATT
TTAAAAGGCG AACGCATAGA AACTAAAAAT ACTCACGGTA CAGGTTGTAC GCTTTCTTCG
GCTATTGCTA GTAATTTAGC TAAAGGCAAG GATTTATTTT ATGCTGTTAG TGAAGCTAAA
GAATATGTAA GAAATGCGAT TTATTATTCA CTCAATCTTG GAAAAGGTTG TGGTCCTACA
AATCATTTTT TCAAGTTTTT AGATGAAAAA TAA
|
|---|
| Protein sequence | MKAKGSELIP VLTIAGSDCS GGAGIQADLK TFSAHNLFGM SVVLSVVAEN TARVISVHDI
PTQSVDEQML AVFEDIVPKA TKIGMIGSCE LMSCVAKNLS EFKPQNVVID PVMFAKNGYA
LMPQENCDFF KQTIVKFADI LTPNIPEAEF LCGFKIANEE QMIKAAKHLC SLGAKAVLLK
GGHSEENAND VLYDGKEIYI LKGERIETKN THGTGCTLSS AIASNLAKGK DLFYAVSEAK
EYVRNAIYYS LNLGKGCGPT NHFFKFLDEK
|
|---|
| |