| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJJ81176_1086 |
|---|
| Symbol | |
|---|
| ID | 4683758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008787 |
|---|
| Strand | + |
|---|
| Start bp | 1005689 |
|---|
| End bp | 1006795 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 639853812 |
|---|
| Product | membrane-associated zinc metalloprotease, putative |
|---|
| Protein accession | YP_001000746 |
|---|
| Protein GI | 121612227 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
|---|
| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGATCTT TATTGCTTTT AATTGTTATT TTGATTTTGG GAATTAAATT TTATTCTATT
GAATTTTTAG CAACTGTTTT AGTCATCTCA TTTTTAATTT TCTTTCACGA ATTAGGACAT
TTTTTAGCTG CAAGATCTTT GGGTGTAAAA GTTGAAGTCT TTAGCATAGG ATTTGGAAAA
AGTCTTATAG AGCGTGAATT TAAAGGCACG AACTATCGCT TAAGTGCTTT GCCACTTGGA
GGATATGTTA AACTTAAAGG ACAAGATGAT ATGCGTCCTG GTTTTGAAAA TCTAGACAAA
GATAGCTATA GCATTTTAAG TCCTTTAAAA AAGATTTATA TTCTTTTTGC TGGACCATTT
TTTAATCTAA TTTTAGCTTT TTTTCTTTAT ATTATCATAG GAAATTTAGG TCTAAACAAA
CTTGCTCCGC AAATAGGAAA CATAGCGCCA AACTCTGCTG CACAAGAAAT AGGACTTCAA
AAAAATGATA CTATCTTAGA AATTAACGGT GTAAAAATTC AAAGCTTTGA TGAAATTTCA
AAGCATTTAA GTTTAGAGCC TTTGAAAATA TTAATCGATA GAGAAGGAAA AAATTTAGAA
TTTACCCTAA CTCCAAAAAT AGGACAAGGA TATAATGACT TTGGACAAAT CGTTGAAAAA
CCTCAACTTG GAGTCAGTCC AAATGGGACA AGCACTCTTG TAAAACATCA AGGTTTAGAA
AGTTTTAAAT ATGCCATACA AGAAAGTTTT CAAGCTTCTA CACTCATCAT CAAGGGTATA
ATAAAACTCA TAAGTGGTGA AGTTGAAGCA AAAAATTTAG GCGGTATTAT CACCATGACT
GAAATTACCT CAAAGGCTGC ACAAAATAGC TTTACTTTGC TTTTATTTAT CACTGCTTTA
ATTTCTATAA ATTTAGGCAT TTTAAATCTT TTACCTATTC CTATGCTTGA TGGAGGACAT
ATACTTTTTA ATCTTTATGA AATGATTTTT AGACGCAAGG TTCCACAGCG TGCTTTTGAA
TACTTAAGTT ACGCAGGCAT GGCAATACTT TTAAGCTTAA TGCTCTTTGC AACTTATAAT
GATATATCAA GGATTGCAGG TGAATAA
|
|---|
| Protein sequence | MRSLLLLIVI LILGIKFYSI EFLATVLVIS FLIFFHELGH FLAARSLGVK VEVFSIGFGK
SLIEREFKGT NYRLSALPLG GYVKLKGQDD MRPGFENLDK DSYSILSPLK KIYILFAGPF
FNLILAFFLY IIIGNLGLNK LAPQIGNIAP NSAAQEIGLQ KNDTILEING VKIQSFDEIS
KHLSLEPLKI LIDREGKNLE FTLTPKIGQG YNDFGQIVEK PQLGVSPNGT STLVKHQGLE
SFKYAIQESF QASTLIIKGI IKLISGEVEA KNLGGIITMT EITSKAAQNS FTLLLFITAL
ISINLGILNL LPIPMLDGGH ILFNLYEMIF RRKVPQRAFE YLSYAGMAIL LSLMLFATYN
DISRIAGE
|
|---|
| |