| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJJ81176_1069 |
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| Symbol | dapE |
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| ID | 4682211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008787 |
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| Strand | - |
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| Start bp | 987216 |
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| End bp | 988313 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639853795 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_001000729 |
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| Protein GI | 121612679 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.765563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATGCAA AAGAATTTTT AATCGAACTT TTAAAATTTA AATCTGTTAC GCCAAATGAT
GATGGAGCTT TAAATTTCAT CGCTATGGAA CTGAGTGATT TTGAAGCTTT TTTTATAGAA
AAAGAAGGCA TTAAAAACCT TTTACTCACT AAAAAATTTA AAGATGAAGG CGAGCATTTA
GCTTTTGGTG GGCATGTAGA TGTGGTGCCT GCAGGCGAGG GTTGGAGTAA TAATGCTTTT
GCGCCTGTGG AAAAAGAAGG CTTTATCTAT GCAAGGGGTG CTCAAGATAT GAAAAGCGGA
GTAGCAGCCT TTGTAGATGC GGTAAAGAAT GCGGATTTTA AAGGAGCTAG ACTTAGCCTT
ATTTTAACAA GTGATGAAGA AGGCGAAGCT ATATATGGAA CTAAGGCTGT TTTAGAATGG
ATGCAAGAAA GAGATATGCT ACCTGATTAT GCTGTGGTTG CCGAGCCAAC CTGCGTTAAA
AAAATCGGCG ATAGTATTAA AATAGGGCGT CGTGGTTCTA TTAATGGAAA GCTTTTAATC
CGTGGAAAAC AAGGGCATGT TGCTTATCCT GAAAAATGTA TCAATCCTGT GCATGATTTT
GCGCCAGTTT TAAAGCTTTT AGCGGGTTTT GATCTTGATC CTGGAAGTGC TGAATTTAGT
CCTTCAAAAA TCGTTATAAC TGATATTCGC GGAGGTATGG AGGTGTGTAA TGTTACGCCA
AATGATTTAA AACTTATGTT TAATGTTCGC AATTCCCCTG ATACAAGCTT AGAAGATGTA
AAAAGTTATG TAGAAAAAAT TTGTCATGGT TTAAACTATG AGTTAGAGCT AAAACAATCA
AGCGAAGCTT TTTTGACAAA TATCGATAAT AAAATCGTTC AAAAAATGAA TGAAAGCGTT
CAAAAAATCA CCCATGAAGT GCCAGAGCTT AATACTAAAG GCGGCACAAG TGATGCAAGG
TATTTTGCAA AATACGGTGT AAAGGTAGTG GAATTTGGGG TTTGTAATGA TAGAATTCAC
GCTATTGATG AAAGGGTAAG TATAGAAGAA TTTGAAAAAC TTTGTCTTGT TTTTAAAGAC
TTGATAGAAA ATTTTTAA
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| Protein sequence | MNAKEFLIEL LKFKSVTPND DGALNFIAME LSDFEAFFIE KEGIKNLLLT KKFKDEGEHL
AFGGHVDVVP AGEGWSNNAF APVEKEGFIY ARGAQDMKSG VAAFVDAVKN ADFKGARLSL
ILTSDEEGEA IYGTKAVLEW MQERDMLPDY AVVAEPTCVK KIGDSIKIGR RGSINGKLLI
RGKQGHVAYP EKCINPVHDF APVLKLLAGF DLDPGSAEFS PSKIVITDIR GGMEVCNVTP
NDLKLMFNVR NSPDTSLEDV KSYVEKICHG LNYELELKQS SEAFLTNIDN KIVQKMNESV
QKITHEVPEL NTKGGTSDAR YFAKYGVKVV EFGVCNDRIH AIDERVSIEE FEKLCLVFKD
LIENF
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