Gene CJJ81176_1036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCJJ81176_1036 
SymbollivH 
ID4682916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. jejuni 81-176 
KingdomBacteria 
Replicon accessionNC_008787 
Strand
Start bp956511 
End bp957407 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content34% 
IMG OID639853762 
Producthigh affinity branched-chain amino acid ABC transporter, permease protein 
Protein accessionYP_001000696 
Protein GI121613045 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.203386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTCTA CTTTATTTTT ACAACAACTT GTTAATGGAC TTAGTTTGGG CAGTATGTAT 
GCCCTTATTG CTGTTGGCTA TACTATGGTT TATGGCGTGT TAAGACTTAT TAATTTTGCT
CACGGCGATA TTATGATGGT TGGTGCTTAT GCAGCTCTTT TTTGCATGAC TAATCTAAAT
GTTCCTTTTC TAGGAGCTTT GTCTTTGGCA ATGATTTTTG CTGCTTGTGT TGGAATAGCT
ACAGATAGAA TCGCTTATAA ACCTTTAAGA CAGGCTCCTA GAATTTCATT GTTGATTACA
GCAATTGGTA TTAGTTTTTT CTTGCAAAAT CTTTTTAATA TACTTTTTAC TTCAACACCT
AGAACTTTTA CACCGCCAAG TTATTTTGAG GAAAGTGTTA ATTTTGGCGG AGTGATAACA
ACTTATGGTT CTTTAATGGT TCCTGCTCTT ACATTTGTTA TTTTAATAGC AGTGTTATGG
ATTTTATATA AAAGCAAATA TGGTATAGCT ATTCGTGCTT TGGCATTTGA TATACAAACA
GTAAATTTAA TGGGTATAGA TGCAAATCGT ATTATTGCTA TAGTTTTTGC CCTAGGTTCA
GCTTTGGCAG CAGTTGGGGG CGTTTTTTGG GCTGCAAATT ATTACTCTGT TGAACCTACT
ATGGGAACTT TAATAGGTTT GAAAGCTTTT GCTGCTGCAG TTTTAGGAGG TATAGGTTCT
GTAGTAGGTG CAGTTTTGGG TGGACTTATT ATAGGATTTA CTGAAGTTGT TGTTGTGGCT
TTTTTTCCAG ATTTATCAGG CTTTAAAGAT GCATTTGCTT TTATTTTTTT GGTGTTTATA
TTGTTATTTA GACCTACGGG AATTTTAGGT ATAAATTTTG AAAAGAGTAG GTTTTGA
 
Protein sequence
MDSTLFLQQL VNGLSLGSMY ALIAVGYTMV YGVLRLINFA HGDIMMVGAY AALFCMTNLN 
VPFLGALSLA MIFAACVGIA TDRIAYKPLR QAPRISLLIT AIGISFFLQN LFNILFTSTP
RTFTPPSYFE ESVNFGGVIT TYGSLMVPAL TFVILIAVLW ILYKSKYGIA IRALAFDIQT
VNLMGIDANR IIAIVFALGS ALAAVGGVFW AANYYSVEPT MGTLIGLKAF AAAVLGGIGS
VVGAVLGGLI IGFTEVVVVA FFPDLSGFKD AFAFIFLVFI LLFRPTGILG INFEKSRF