Gene CJJ81176_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCJJ81176_1000 
SymbolcjaB 
ID4683565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. jejuni 81-176 
KingdomBacteria 
Replicon accessionNC_008787 
Strand
Start bp920953 
End bp922200 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content30% 
IMG OID639853726 
ProductCjaB protein 
Protein accessionYP_001000661 
Protein GI121612328 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAA AATACAAAAA TATTATTTAT GCTTCTTTGG GTGGAATTTT AGAATTTTAT 
GATTTTGTGC TTTTTGCCTT TTTTTTGGAT ATTTTTGCTA AGGTATTCTT TCCGCAAAAT
GATGCTTTTT GGATGCAGAT AAATGCTTAT ATAGCCTTTG GTGCTGCTTA TTTAGCGCGT
CCTTTTGGTT CTATTGTGAT GGCACATTTT GCTGATAGAT ATGGAAGAAA GAATATTTTT
TATATTTCTA TGCTTTTGAT GGTTTTGCCT AGTTTTGCTT TAGCTTTTTT ACCAAGTTAT
GAAAGTATAG GTATATTTGC TACTTTGATT TTATTTACTA TTCGTATTTT GCAAGGTTTA
GCCGTTGGAA CTGAGGTGAG CGGAGCTTGG ATTTATGTGA GCGAATTTGT CAAAGGGCGT
CAAATTCCTT TAGCTCTTGG TTTTATTTCA GCGACTTTAA CCATAGGTTT ATTGCTAGGA
AATATTGCCA CTTTAGGCAT AAGATCTTAT TTTACCCCAG AAGAAGTTCA AAGCTATGCT
TGGAGAATTC CTTTTATCAT AGGAGGATTT TTTGGAATTT TAGCTTTGTT TTTAAGAAAT
AAACTCAGCG AAACTCCAGA ATTTATAAAA GTTCAAAATG AAAAGAAAAT TTTAAATTTT
CCATTGTTTG AAGCTTTAAA AACTCATAAA ATGAGTATGC TTGTTTGTTT TTTAATGACC
ATGGTTTTAA CAAGCGGTGT GGCAACTTTG ATGATTTTGC CTAAGTATTT TGAAAGTCTT
TTAGCTATGA GTAAAACTTC TGCTTTATGG GTGCAAAATT TTGCTATTTT AGCGGTGATT
TTTGGAGCTT TATTTCAAGG TTTTTTAGCA AGCAAATGGG GAAGCTATAA AATTTGCTCT
ATTTTTAGTA TAGCTTTTAT TATCTTTGGT ATGTTTTTTA GTTTTTATGA TGAGAATTTT
TTATTTTATT TTTTACTGGC TTGTTTTGCA CAAGGTATTA TTACTTTCGC GCCTGTTTTT
ATGACGCAAA TTTTTAAAAG CGAACTTAAA TTTAGTGGGC TTAGTTTTGC TTATAATATT
TCTTATGCGA TTTTAGGCTT TTTAACCCCT TTTATAGTTA ATGCTTTTTA TAAAGAGTAT
TTAGGTATTT ATCTTGCTAT AGTGGGATTT TGCTCCTTGC TTTGTGTGTT TTTGTTAAAA
CGCGTTTTTG CAAGAAGCAA GATTAAAGAA TTAAGCATTG TCTTTTAA
 
Protein sequence
MQKKYKNIIY ASLGGILEFY DFVLFAFFLD IFAKVFFPQN DAFWMQINAY IAFGAAYLAR 
PFGSIVMAHF ADRYGRKNIF YISMLLMVLP SFALAFLPSY ESIGIFATLI LFTIRILQGL
AVGTEVSGAW IYVSEFVKGR QIPLALGFIS ATLTIGLLLG NIATLGIRSY FTPEEVQSYA
WRIPFIIGGF FGILALFLRN KLSETPEFIK VQNEKKILNF PLFEALKTHK MSMLVCFLMT
MVLTSGVATL MILPKYFESL LAMSKTSALW VQNFAILAVI FGALFQGFLA SKWGSYKICS
IFSIAFIIFG MFFSFYDENF LFYFLLACFA QGIITFAPVF MTQIFKSELK FSGLSFAYNI
SYAILGFLTP FIVNAFYKEY LGIYLAIVGF CSLLCVFLLK RVFARSKIKE LSIVF