| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJJ81176_0979 |
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| Symbol | trmE |
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| ID | 4683065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008787 |
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| Strand | - |
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| Start bp | 903435 |
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| End bp | 904763 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 639853703 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_001000638 |
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| Protein GI | 121612630 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.523955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTGATA CTATAGCGGC TATTGCCACA GCTCATGGTG TGGGTTCGAT TTCTATTGTA
AGATTAAGCG GTGAAAGGGC TTTAGAATTT GCCTTAAAGC TTAGCCACAA AACCAAACTT
ACCCCGCGCC ATGCTACTTT TACAAAACTT TTTAATCAAA ATAATGAAAT TATCGATGAA
GCTATAATGA TATATTTTAA AGCCCCTTAT AGTTTTACAG GGGAAGATAT AGTAGAGTTT
CAAACTCATG GAGGATTTAG TGTGAGTGAA GTTTTACTCG AAGAACTTGT GAGTTTAGGA
GCAAGACTTG CTTTAGCAGG GGAATTTAGC AAAAGAGCGT GTTTAAATGG CAAAATGACT
CCTTTAAAAG CTTTAAATAT ACAAGATCTC ATACTTTCAA AATCTGCACT TGCAGCTAAA
ATTATAGCAC GCAACATGCA AGGAAACTTA GGAGAACTTT TAGAAAAAAT TCGCACAGAT
TTGGTTAAAA CCTTGGCTTT TGTAGAAACT AGCATTGATT ATGCTGATGA TGATTTACCT
TCTGATTTAT TAGAGCAAAT TTCTACTATG TGTGAAGAAA ATTCTAAAAT TTTAAAAGAA
ATTTATACGC TTTCTCAAAG CAAAAAAGGA CTCATAGAAG GTTTTAAAAT CGCTATTGTA
GGTAAGCCAA ATGTAGGCAA ATCTTCGCTT TTAAATGCCT TGCTTTCTTA TGAAAGAGCT
ATTGTTTCAG ATATAGCAGG CACCACTCGT GATACTATAG AAGAGAACTT TAAATTAGGA
ACGCATTTAT TACGCATTAT AGATACAGCG GGTATTAGGG AAAGTAAAGA TGTTATAGAA
CAAATCGGCG TAGCTTTAAG TAAAAAAAGT TTAGAAGATG CAGATATTAT TTTGGCAGTC
TTTGATGCTT CAAGAGTGCA AGATAAAGAA GATGAGAAAA TTTTTGACTT ATTAGCAAAT
ACTGATAAAA AAATCTTTTG GATTTTAAAT AAAAGTGATT TAGAAAATGT TTTCAAAAAT
ACTCAAAATA AAAATTTTAT CAAGCTTAGT GCTCAAAAAG ACATTACTTT GTTAAAAGAA
GAATTGCAAA ATTATCTTAA TTCTTTTGAT AGCGAAGGTA TTATGGTAAG TTCTTTAGAT
CTTATTAATG CTTGTAAAAT TTCAAGTGAA GCGATTTTTA GAGCTAAGGG GCTTTTAGAG
GAAAGTTCTT TAGAGCTTTT TGCTTTTGAG CTTAATTTAG CTATTAATGA ACTTGCAAGA
TTTACCAAAG ATTTTCAAAG AGATGAAATT TTAGACGAAA TGTTTGGTAA TTTTTGTTTA
GGAAAATGA
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| Protein sequence | MSDTIAAIAT AHGVGSISIV RLSGERALEF ALKLSHKTKL TPRHATFTKL FNQNNEIIDE
AIMIYFKAPY SFTGEDIVEF QTHGGFSVSE VLLEELVSLG ARLALAGEFS KRACLNGKMT
PLKALNIQDL ILSKSALAAK IIARNMQGNL GELLEKIRTD LVKTLAFVET SIDYADDDLP
SDLLEQISTM CEENSKILKE IYTLSQSKKG LIEGFKIAIV GKPNVGKSSL LNALLSYERA
IVSDIAGTTR DTIEENFKLG THLLRIIDTA GIRESKDVIE QIGVALSKKS LEDADIILAV
FDASRVQDKE DEKIFDLLAN TDKKIFWILN KSDLENVFKN TQNKNFIKLS AQKDITLLKE
ELQNYLNSFD SEGIMVSSLD LINACKISSE AIFRAKGLLE ESSLELFAFE LNLAINELAR
FTKDFQRDEI LDEMFGNFCL GK
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