Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJJ81176_0902 |
Symbol | rpsA |
ID | 4683568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
Kingdom | Bacteria |
Replicon accession | NC_008787 |
Strand | - |
Start bp | 832680 |
End bp | 834350 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 639853625 |
Product | 30S ribosomal protein S1 |
Protein accession | YP_001000568 |
Protein GI | 121613103 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0539] Ribosomal protein S1 |
TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAGG TGAACAAAAA AGTTCAAGGC GGCGTAGATG ATTATCTTGA GGAAGAAGAT TTTGGACAGC TTTTAGAAGC TTTTGATAAA TCAAGAGAAG AGGCTACAAC AGAGGGTGTG ATTGTAGAGA TCAAAAATGA TGAAGTTTAT GTAGATATAG GTAAAAAATC TGAAGGTATT TTAGCTCTTA GCGAAATACA AGGTGACAAT TCTAAGCTAT TGTTTAATGT AGGCGATAGT ATTAAAGTTG CTGTTATGGG TTCTCGTGGT GGCAGATCTT TACTTTCTCA TAAAAAAGCT TTGAGAAAAG AAAAAGTTAT TGAATTTATT AAAAACTATC AAGAAAATCA AGATGATATT TTTACCGTAA AAGTAGTTGG AAAAAATAAA GGCGGATTGA TAGTTGTTGA TGAAAATGAT GTTGAATTTT TCTTACCAAA ATCTCAATAT GGCTTTAAAG AAACAAATAA TATTATAGGT AAAACGTTTA AAGTTAAAAT TATTAAAATC GACAAAGATG AGCAAAGTAT CATTGTTTCT CGTAAAAAAA CTTTAGATGA TGAGAGAAGA AAACGAAAAG AATTGATCAA TAATATAGCA CAACAAGAAG ATTTAATTGA AGGTATTGTA AAAAAAATTA CCACTTATGG TATGTTTGTA GATGTAGGAG GTGTTGATGG CCTTGTTCAT TACAGCGAAA TTTCTTACAA AGGACCTGTA AATCCTGGAA CACTTTATAA AGAGGGCGAT AAAGTTCCAG TTAAAGTAAT AAAGTATGAT AAAGAACGCA AACATTTATC CTTATCTATA AAAGCGGCTT TACCTGATCC ATGGAGCGAG ATAAAAGATA CTCTTGATGT AGGTGATACC ATTAAAGTAA TAGTATCAAA TATAGAACCT TATGGTGCTT TTGTAGATTT AGGAAATGAT ATAGAAGGAT TTTTACATAT CAGTGAAATT TCTTGGGATA AAAATATTAA AAATCCAAAA GATTATATCA ACAAAGGTCA AGAAATTGAT GTTGAAGTAA TTGAAATCAA TCCAAATGAA AGACGCTTAA GAGTATCTTT AAGAAATTTA CTTTCTAGAC CTTTTGATGG ATTTATGAAA TCTTACAAAA TTGCAGATGT GGTTGAAGGA GAAATTACCT CAGTAACTTC TTTTGGTGCA TTTGTTAAAC TTGGTGGTAT TGAAGGTTTA TTGCATAATG AAGATGCTTC TTGGGATAGA AACGATAAAT GCAAAGACAA ATTCTCTCAA GGGGATAAAA TCAAGGTAAA AATTATCAAA ATAGACGAAG AAAACCAAAA AATATCATTA AGCACAAAAG AATTAAGCAG TTCTCCAGTG CAAGAATATG CCAAAATTCA TAAAGTCGGC GATATTGTAA AAGGCACTAT CCGTGATATT AAAGATTTTG GTGTTTTTGT AGAGCTAAGT AAAAATGTTG ATGCTTTAAT TCATAAAGAA GATATAAGCA CTTCTATGCT TGAAAATTTA AAAATTGGCG ACGATATTGA AGCTGCTATA GTTTTTATTG ATGAAAAGAA AAATAGAATT CGCCTAAGTG TTAAAAATCT TGTTAGAATG AAAGAAAGAG AAGTTCTTAA TGAAATCAAT AATGATGATA AAGTGACTTT AGGTGATATC ATTAAAGATC AGCTAGCTTA A
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Protein sequence | MSEVNKKVQG GVDDYLEEED FGQLLEAFDK SREEATTEGV IVEIKNDEVY VDIGKKSEGI LALSEIQGDN SKLLFNVGDS IKVAVMGSRG GRSLLSHKKA LRKEKVIEFI KNYQENQDDI FTVKVVGKNK GGLIVVDEND VEFFLPKSQY GFKETNNIIG KTFKVKIIKI DKDEQSIIVS RKKTLDDERR KRKELINNIA QQEDLIEGIV KKITTYGMFV DVGGVDGLVH YSEISYKGPV NPGTLYKEGD KVPVKVIKYD KERKHLSLSI KAALPDPWSE IKDTLDVGDT IKVIVSNIEP YGAFVDLGND IEGFLHISEI SWDKNIKNPK DYINKGQEID VEVIEINPNE RRLRVSLRNL LSRPFDGFMK SYKIADVVEG EITSVTSFGA FVKLGGIEGL LHNEDASWDR NDKCKDKFSQ GDKIKVKIIK IDEENQKISL STKELSSSPV QEYAKIHKVG DIVKGTIRDI KDFGVFVELS KNVDALIHKE DISTSMLENL KIGDDIEAAI VFIDEKKNRI RLSVKNLVRM KEREVLNEIN NDDKVTLGDI IKDQLA
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