Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJJ81176_0879 |
Symbol | |
ID | 4682503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
Kingdom | Bacteria |
Replicon accession | NC_008787 |
Strand | - |
Start bp | 808953 |
End bp | 810017 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 639853602 |
Product | phage integrase family site specific recombinase |
Protein accession | YP_001000547 |
Protein GI | 121612957 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.159654 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATACC CTTTAGATTG TGAAGAAAAT TTTGAAAAAT CATTCTTATT TTGGTTAGCA AAATATGTAA AATTTAAACT CAACTCACTA TCTAACAAAG AGTTAAAAAA TCCACAAGCT TTAGCAGAAG TTAATTTTAC TCTTACAAAA GGTGTAAAAA ACATTGATGA ACTTGATGCT CTAGCAAAAA AAGCAAGAAA TGCTGGTTTA AGTGGAGTTA ATACTTATTT TAACCCCTTA AAAAAAGTAT TTGAATATTT AAATTTTTAC AAGCTTTATT CTTTAAAACA GATTGATGAA GAACTCATTG TAGAAGTTTT AGCAAGTATA ACAGGTGCTT TATCAGATGC AAGTAAAAAA AATTACCGTA TTGCTGTGAT TAATTTTTTT GATTTTTTAG ACAAGCAAAA TGAAGAAGAT GAAAAAGCAC ATATTTTCGA TATTAATCTT AAAAACTGGG CAGGTATAGC AGGTTCTAAA GGGGTAAAAT TACCTGAATT TATGAGCGAA GAAGAGCTTA AAAAATTTCT TGATGCTATT GAAAATGCAG ATTTTAAAAA CAATACCATA CGCAATAAAC TTATTATTAA AATCATCATT TTTACAGGCA TACGGGTAAG TGAAGCTATC AATATCAAAA TGGGTGATAT TAGCGAAGAA AACGATCTTT ATATCATAAG AATAAGAGCT AAAGGCAATA AATATCGTGT TGTAATGATA AAAAAAGAAC TTATTTACGA TTTGCTTAAA AATGTAAGTA TTAATTATAT GAGTAAAGAC GCCCTACTTT TTGTCAATAA AAAAGGCACT CCACTGACTC AATCTTATGT CAGTCGCATA GTAGAACAGC TTTTATTTCG TGCAGGAATT CGCAAACAAA AAAATGGTGC TCATATGTTG CGTCATACTT TTGCCACCCT GCTTTATAAA AAGCAAAAAG ATTTAGTTTT AGTTCAAGAA GCTTTAGGGC ATGCAAGTTT AAATACCTCA AGAATTTACA CTCATTTTGA TAATGATAAA TTAAAACTTG CCGCACAGGT TGCAAAGGAA TTAAGTGACT CTTGA
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Protein sequence | MKYPLDCEEN FEKSFLFWLA KYVKFKLNSL SNKELKNPQA LAEVNFTLTK GVKNIDELDA LAKKARNAGL SGVNTYFNPL KKVFEYLNFY KLYSLKQIDE ELIVEVLASI TGALSDASKK NYRIAVINFF DFLDKQNEED EKAHIFDINL KNWAGIAGSK GVKLPEFMSE EELKKFLDAI ENADFKNNTI RNKLIIKIII FTGIRVSEAI NIKMGDISEE NDLYIIRIRA KGNKYRVVMI KKELIYDLLK NVSINYMSKD ALLFVNKKGT PLTQSYVSRI VEQLLFRAGI RKQKNGAHML RHTFATLLYK KQKDLVLVQE ALGHASLNTS RIYTHFDNDK LKLAAQVAKE LSDS
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