Gene CJJ81176_0879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCJJ81176_0879 
Symbol 
ID4682503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. jejuni 81-176 
KingdomBacteria 
Replicon accessionNC_008787 
Strand
Start bp808953 
End bp810017 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content29% 
IMG OID639853602 
Productphage integrase family site specific recombinase 
Protein accessionYP_001000547 
Protein GI121612957 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.159654 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACC CTTTAGATTG TGAAGAAAAT TTTGAAAAAT CATTCTTATT TTGGTTAGCA 
AAATATGTAA AATTTAAACT CAACTCACTA TCTAACAAAG AGTTAAAAAA TCCACAAGCT
TTAGCAGAAG TTAATTTTAC TCTTACAAAA GGTGTAAAAA ACATTGATGA ACTTGATGCT
CTAGCAAAAA AAGCAAGAAA TGCTGGTTTA AGTGGAGTTA ATACTTATTT TAACCCCTTA
AAAAAAGTAT TTGAATATTT AAATTTTTAC AAGCTTTATT CTTTAAAACA GATTGATGAA
GAACTCATTG TAGAAGTTTT AGCAAGTATA ACAGGTGCTT TATCAGATGC AAGTAAAAAA
AATTACCGTA TTGCTGTGAT TAATTTTTTT GATTTTTTAG ACAAGCAAAA TGAAGAAGAT
GAAAAAGCAC ATATTTTCGA TATTAATCTT AAAAACTGGG CAGGTATAGC AGGTTCTAAA
GGGGTAAAAT TACCTGAATT TATGAGCGAA GAAGAGCTTA AAAAATTTCT TGATGCTATT
GAAAATGCAG ATTTTAAAAA CAATACCATA CGCAATAAAC TTATTATTAA AATCATCATT
TTTACAGGCA TACGGGTAAG TGAAGCTATC AATATCAAAA TGGGTGATAT TAGCGAAGAA
AACGATCTTT ATATCATAAG AATAAGAGCT AAAGGCAATA AATATCGTGT TGTAATGATA
AAAAAAGAAC TTATTTACGA TTTGCTTAAA AATGTAAGTA TTAATTATAT GAGTAAAGAC
GCCCTACTTT TTGTCAATAA AAAAGGCACT CCACTGACTC AATCTTATGT CAGTCGCATA
GTAGAACAGC TTTTATTTCG TGCAGGAATT CGCAAACAAA AAAATGGTGC TCATATGTTG
CGTCATACTT TTGCCACCCT GCTTTATAAA AAGCAAAAAG ATTTAGTTTT AGTTCAAGAA
GCTTTAGGGC ATGCAAGTTT AAATACCTCA AGAATTTACA CTCATTTTGA TAATGATAAA
TTAAAACTTG CCGCACAGGT TGCAAAGGAA TTAAGTGACT CTTGA
 
Protein sequence
MKYPLDCEEN FEKSFLFWLA KYVKFKLNSL SNKELKNPQA LAEVNFTLTK GVKNIDELDA 
LAKKARNAGL SGVNTYFNPL KKVFEYLNFY KLYSLKQIDE ELIVEVLASI TGALSDASKK
NYRIAVINFF DFLDKQNEED EKAHIFDINL KNWAGIAGSK GVKLPEFMSE EELKKFLDAI
ENADFKNNTI RNKLIIKIII FTGIRVSEAI NIKMGDISEE NDLYIIRIRA KGNKYRVVMI
KKELIYDLLK NVSINYMSKD ALLFVNKKGT PLTQSYVSRI VEQLLFRAGI RKQKNGAHML
RHTFATLLYK KQKDLVLVQE ALGHASLNTS RIYTHFDNDK LKLAAQVAKE LSDS