Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJJ81176_0844 |
Symbol | truA |
ID | 4683140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
Kingdom | Bacteria |
Replicon accession | NC_008787 |
Strand | + |
Start bp | 774021 |
End bp | 774746 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 639853567 |
Product | tRNA pseudouridine synthase A |
Protein accession | YP_001000512 |
Protein GI | 121613330 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0101] Pseudouridylate synthase |
TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATGAAAA TAAAAATTAT ATTTTCTTAT GATGGCTCTG CTTTTTTAGG TTCTGCTAGT CAGCCTCATA AAAAAGGTGT TCAAGATGCT TTAAGTGGGG CCTTATCGCA TTTGGGTATT GTTTCACCTC TTTTGATGGC TTCTCGTACA GATAAAGGAG TACATGCAAG CTATGCTGTA GCTAGTGTGG GGTGTGGAGA TCATTTTGTA AATTTAGAAT ATCTTCAAAA ACAGCTTAAT AAATTTTCCC ATCCTTTTAT CCATATCAAA AAAATTGAAA AAGTAAAAGA TGATTTTGAA GTAAGATTTG ATGTAAAAAG TAGAGAATAC CGCTATATAT TTTCTCACTC TTCTTATAGT CCTTTTATGG CTTCTTATGT ACATTTTTAT CCTAAATTTG ACTTAGATAA GGCTAACGAG CTTTTGGGTT TTTTTGTAGG AAAAAAGGAT TTAAAGTTTT TTTGCAAAAG TGGAGGAGAT AATAAAACGA CTTTAAGAGA AATTTTTATT GCTAGAGCTT ATGCTTATAA AGATTTTAGC ATTTTTCATT TTAAAGCTAA TGGTTTTTTA AGAGGGCAAA TTAGATTAAG CGTAGCAAGT GTTTTAAAGG TTTTAGAAGG AAAAATGAGT GAAAAAGAAC TCAAAGAACA GATTGAGGCC AAAAAGCAAT ACAATCACTT TTTAGCACCG CCAAATGGGC TTTATTTAAG CCGTATATGT TATTAA
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Protein sequence | MMKIKIIFSY DGSAFLGSAS QPHKKGVQDA LSGALSHLGI VSPLLMASRT DKGVHASYAV ASVGCGDHFV NLEYLQKQLN KFSHPFIHIK KIEKVKDDFE VRFDVKSREY RYIFSHSSYS PFMASYVHFY PKFDLDKANE LLGFFVGKKD LKFFCKSGGD NKTTLREIFI ARAYAYKDFS IFHFKANGFL RGQIRLSVAS VLKVLEGKMS EKELKEQIEA KKQYNHFLAP PNGLYLSRIC Y
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