| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJJ81176_0796 |
|---|
| Symbol | valS |
|---|
| ID | 4683192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008787 |
|---|
| Strand | - |
|---|
| Start bp | 724840 |
|---|
| End bp | 727452 |
|---|
| Gene Length | 2613 bp |
|---|
| Protein Length | 870 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 639853519 |
|---|
| Product | valyl-tRNA synthetase |
|---|
| Protein accession | YP_001000464 |
|---|
| Protein GI | 121613655 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0525] Valyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.933031 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATGATA AAAATTTAGA AAAAGAGTAT TATCAAATTT GCGAAGAACG CGGATATTTT
GAGATCGATG GCAATAAAAC CATACAAGAA AAAGATAAAA ATTTCTGCAT TATGATGCCT
CCTCCTAATG TCACTGGAGT TTTACACATA GGACATGCTT TAACTTTTAC TCTGCAAGAT
ATTATGACGC GTTACAAAAG AATGGACGGT TATAAGGTTC TTTATCAACC AGGACTTGAT
CACGCAGGTA TTGCCACTCA AAATGTTGTA GAAAAACAAC TCCTTGCTCA AGGCATTAAA
AAAGAAGAAC TAGGTAGAGA GAAATTTATA GAAAAAGTCT GGGAGTGGAA AGAGCAAAGC
GGTGGAAAAA TTTTAGACCA AATGAGAACA CTAGGCATCA CTCCTGCATG GAGTCGCTTG
CGTTTTACTA TGGATGAAGG TTTGGTTAAT GCCGTAAAAA AAGCCTTTGT GGAACTTTAT
GATAAAAGAC TTATTGTACG TGGAAACTAC ATGATAAATT GGTGTACTCA CGATGGCGCT
TTAAGTGATA TAGAAGTTGA ATACAAAGAA AACAAAGGAA AACTTTATCA TATTAAATAC
TTTTTAAAAG ATAGCGATGA ATTTTTAGTA GTAGCCACAA CGCGTCCTGA AACTTTTTTT
GGCGATACTG CGGTTATGGT GCATCCTGAT GATGAACGCT ATACTAAATT TGTGGACAAA
GAAGTGATTT TGCCTATAAG CAAAAAAGCC ATTAAAATCA TAGCCGATGA ACATGTAGAA
AAAGAATTTG GAACAGGAGT TGTAAAAGTT ACTCCCGCTC ATGACATGAA CGATTATGAA
GTAGGACTTA GACATAATTT AGATTTTATA AGTGTTTTTG ATGAAAAAGG AATTTTAAAC
GAGCATTGTT TAGAGTTTCA AGGTTTAGAA CGCTTAGAAG CAAGAGAAAA AATCGTAGCC
AAACTTGAAA GTCTTGGTTT TATAGAAAAA ATAGAAGAGC ATAACAATCA AATAGGATAT
TGTTATCGTT GCAACAATAT AGTTGAACCT TATATCTCCA AACAATGGTT TGTAAAAAAA
GAAATCGCCC AAGAAAGTAT AGAAAAAGTT GCGCTTGGAG AAAGTAAATT TTACCCAAAT
CACTGGATAA ATAGCTTTAA TGCCTGGATG AAAGATTTAA GAGATTGGTG TATTTCAAGA
CAACTTTGGT GGGGGCATCA AATTCCTGTG TATTATTGCG AATGCTCTCA TGAATGGGCA
AGCCAACATA CGCCTAAAAC TTGTCCAAAA TGTCAAAGTC AAAATTTCAA ACAAGATGAA
GATGTGCTTG ATACTTGGTT TTCTTCAGGA CTTTGGGCTA TGAGCACTTT AGGCTGGGGG
AATGAAAATT GGGGTAAAGA TAAAATTTGG TCTGAAAAGG ATTTAAAAGA TTTTTATCCC
AATTCTTTAC TCATTACAGG TTTTGATATT TTATTTTTCT GGGTGGCTAG AATGATGTTT
CAAAGCACTA ATGCCTTACA TCAACTTCCT TTTAAAGATA TTTATTTACA TGCTCTTGTG
AAAGATGAGC AAGGTAGAAA AATGAGCAAA AGCCTTGGAA ATGTCATCGA TCCAAATGAA
AGCATTAAAG AATATAGTGC TGATATTTTA CGCTTTACTT TAGCACTTCT TGCTATACAA
GGACGCGATA TTAAACTTAG CAATGATAAA CTTTTACAAG TTAGAAATTT TACAAATAAA
ATTTATAATG CTACAAATTA TCTGCTTTTA AATGAAAGTA AATTTGAAGA TTTGGAAAAT
ATCACACTTC ATTCAGAATT AGCAAAATAT ATTTATGCCA AATTTCAAAC TTGTGTTAAG
GATGTAAGAG AAAATTTAGA CAATTATCGC TTTAATGATG CAGCTAATAC TCTATATAAA
TTCTTTTGGG ATGATTTTTG CGATTGGGGT ATAGAGCTTA GCAAAGCCGA AAAATCAAGC
GTTAAAGAAC TTGGTAGTAT TTTCAAAGAA GCTTTAAAAC TTTTAAATCC TTTCATGCCT
TTTATCAGCG AGTATTTATA CCACAAACTA AGCGATACAG AACTTAAAAC AAGCCCTTCT
ATTATGATAA GCAAATATCC AAAATTTAAA GAACAAGATA AAAATATAGA AAAAATCTTT
TCTTTGCTCA TAGAAAGCAT AGTTGGTATC CGCCGTGCTA AAAGTTTAAT CGATCTTGGA
AATTCTAAAA TAGAAAAAGC TTATATCAAA TTTAACGATA AAAAAATCAA AGATGAAATC
AAAGCTTATA TGAATTTTAT CATGATGCTC GCAAAGTGCG AGCAAATAGA ATTTAGTGAA
GAAAAATTAC CAAAGGCAAT ATGTGATGTT AGCGAGAATT TAGAAATTTT TATTACGCTT
GAAAATGTTG ATTTAAGTGG TATTTTAACA AGACTTGAAA ATCAAAAAAA TAAGCTTGAA
AAAGAAAGTT TCAAGCTTAA CTCCATGCTT TCAAATGAAA AATTCATCGC TAACGCACCT
AAAGAGGTGG TGGAGCAAAA TAAAGAAGCC CTAGAAAATT TAAAAATTCA ACTTGAAAAA
ATATCAGTTG AACTTCAAAA TCTAAGAGGT TAA
|
|---|
| Protein sequence | MYDKNLEKEY YQICEERGYF EIDGNKTIQE KDKNFCIMMP PPNVTGVLHI GHALTFTLQD
IMTRYKRMDG YKVLYQPGLD HAGIATQNVV EKQLLAQGIK KEELGREKFI EKVWEWKEQS
GGKILDQMRT LGITPAWSRL RFTMDEGLVN AVKKAFVELY DKRLIVRGNY MINWCTHDGA
LSDIEVEYKE NKGKLYHIKY FLKDSDEFLV VATTRPETFF GDTAVMVHPD DERYTKFVDK
EVILPISKKA IKIIADEHVE KEFGTGVVKV TPAHDMNDYE VGLRHNLDFI SVFDEKGILN
EHCLEFQGLE RLEAREKIVA KLESLGFIEK IEEHNNQIGY CYRCNNIVEP YISKQWFVKK
EIAQESIEKV ALGESKFYPN HWINSFNAWM KDLRDWCISR QLWWGHQIPV YYCECSHEWA
SQHTPKTCPK CQSQNFKQDE DVLDTWFSSG LWAMSTLGWG NENWGKDKIW SEKDLKDFYP
NSLLITGFDI LFFWVARMMF QSTNALHQLP FKDIYLHALV KDEQGRKMSK SLGNVIDPNE
SIKEYSADIL RFTLALLAIQ GRDIKLSNDK LLQVRNFTNK IYNATNYLLL NESKFEDLEN
ITLHSELAKY IYAKFQTCVK DVRENLDNYR FNDAANTLYK FFWDDFCDWG IELSKAEKSS
VKELGSIFKE ALKLLNPFMP FISEYLYHKL SDTELKTSPS IMISKYPKFK EQDKNIEKIF
SLLIESIVGI RRAKSLIDLG NSKIEKAYIK FNDKKIKDEI KAYMNFIMML AKCEQIEFSE
EKLPKAICDV SENLEIFITL ENVDLSGILT RLENQKNKLE KESFKLNSML SNEKFIANAP
KEVVEQNKEA LENLKIQLEK ISVELQNLRG
|
|---|
| |