Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJJ81176_0780 |
Symbol | |
ID | 4682370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
Kingdom | Bacteria |
Replicon accession | NC_008787 |
Strand | + |
Start bp | 708487 |
End bp | 711402 |
Gene Length | 2916 bp |
Protein Length | 971 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 639853503 |
Product | type I site-specific deoxyribonuclease chain R |
Protein accession | YP_001000448 |
Protein GI | 121612543 |
COG category | [V] Defense mechanisms |
COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0180253 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAACT ACAAAGAAAA AGATTTAGAA AATTTCATAG AATCATATTT GTTAGAAAAC CATGCCTATA TCAAAAGAAC AAATGAAAAT TACGATAAAA ATTTATGTTT AGATGTAGAA CTTTTTGAGA ATTTCTTACA AGCTACGCAA AGTGTAGCAC TTGAAGAGCT TAAAAAGCGT TGTGGGCAAA ACTATAAAAA AGAACTTTTT GATCGTATTT TCTCACAGAT CAAAGCTAAA GGCATAGTCA AAGCCTTGCA AGGCTATGTG GAGATCAAAG GCATCAAAAT TTACCTAGCC TTTGCTAAGC CAAATACCAA TGCAAACGAA GAAAGCGTGA AAAAATACGA GCAAAACACC CTTTCTATCA TACGCCAGCT TTACTATAGC ACGCAAAATA AAAACTCCCT TGATATAGTG ATCTTTTTAA ATGGCTTGCC TCTTATCACC ATAGAGCTTA AAAACCATTT CACCGGACAA AATGTCTTTC ACGCCATAAA GCAGTATAAA AAAGACAGAA ACCCAAAAGA AGCTATATTT AACTATACGA TAGTGCATTT TGCGCTAGAT CATGATCTTT GTTACATGAG TACGAAATTA GATCAAGATG CGACTACATT TTTACCTTTT AACCTTGGTT TAAACAATGG TAGTGGCAAA ATAGGCCTAG CAAATGGAGC AGGTAATCCG CCAAGTGATG GTATAAAAAC AGCTTATTTG TGGGAGAAAA TCTTTAAAAA AGATACTTTG CTAAATTTAT TTTTTAATTT TGTGCAAGTT GTAAAAAAGA AAAATGAAGA AATCATCATA TTTCCTAGAT ACCATCAATT CGATGTAGTA GAAAAGCTAC TCGCCCATGC AAAAGAAAAC GGCACAGGGC AACGCTACTT GATCCAGCAT AGTGCAGGAA GTGGCAAGAG TAATTCTATA TCTTGGCTTG CACATAATCT CGTAAGCTTG CATAGACTTG AAAAAAATAT CTTTGATTCT ATCATCGTAG TAACCGATAG AAAAGTGCTT GATAGTCAAA TAAGAGAAAA TGTAAAATCC TTTTCGCAGA CAAAAAATTT AGTAGAAGCT ATCACTCATG GAAGCAAACA GCTTAAAAAT GCTTTAGAAG AAGGTAAGAA AATCATCATC ACAACCATAC AAAAATTTCC TTTTATTTTA GATGAAATCA AAACTTTAAA AAGCAAAACT TTTGCTATCA TTATCGATGA AGCTCATTCA AGTCAAAGCG GAAGTAATGC TCAAAAAATG GCAGAAGCCA TAAGGGATAA AAGCGGCGAT GAAAGTCAAA ATTTAGATGA TGAAATTTTA GAAATCATAA AAAATAAAAA ACTCCAAAGT AATGCTTCTT ATTTTGCATT TACCGCTACG CCTAAGCCAA AAACCTTAGA AATGTTTGGT ATGCCTTGTG ATGTTAATGG AGAACAAAGG TTTATCCCTT TTCATCTTTA CTCGATGAAA CAAGCCATAG AAGAAGGATT TATACTTGAT GTACTAAAAG GTTATACAAC CTATAAAAGT TATTATAAAA TCATATCTTG TACAAATGAT AATCCAAAAT ACGATAAAAA AAGAGCAAAC ACAAAACTAA AAGCCTATGT CCAAAACAAT ATCAAAACAA TCGAACAAAA ATCACAAATC ATGTGTGAGC ATTTTTTCCA AAATAGCTTT AAAAAGATAA ATGGTAAAGC AAAAGCTATG ATTGTAACAA GCTCAAGAGA AAATGCTGTA AAGTATTATC TTGTTTTTAG GGAATATTTA AGAAAAAATT ATCCACATTT TAAAGCCATT GTAGCTTTTT CAGGTGAAGT AAATTTAGAA GGTGAAATTT ATAGCGAAAG TGGTTTAAAT GGTTTTGCGG AAAATGTTTT AAAAGATGAG TTTAAAAAAG ATGAGTATCG TTTTTTAATC GTTGCGGAAA AATACCAAAC CGGATTTGAT GAGCCATTAT TACATACTAT GTATGTGGAT AAAGCATTAA GTGGGGTAAG TGCAGTACAA ACTCTATCAA GACTAAACCG AACTTGCAAA AACAAAGAAA ACACTTTTGT GCTAGATTTT GTAAATACTC ATGAAGATAT AGCAAAATCT TTTAGTGTGT TTTATGAGCA AACTTATTTA AGTGAAGCCA CAGATGATAA TAGAATTTTT GATTTAAAGG CAAATCTAAA TGAGTATGAA ATTTATACCC AAGAAGAAAT AGATGATTTT GCAAATGCTA TTTTAAGAAA AGAAAAAGAA AATATCATTC ATGCAAAATT GGACATAATG CTAGATAGAT TTAATCAAAA AAGTGATGAT GAAAAATTAG ATTTTTATAA TAAAGCAAAA ACTTATCTTA AAGAGTATTC TTTTCTTGCA CAAATATTGC CTTATGAAGA CATAGAGCTT GAAAAACTCT ATATATTGCT TAAAAAACTT GCTAGTAAGA TCATCTTGCC TAAATCAGAG GATTTAGCTA AAGGAATTTT AGATAATGTG GATTTTGATA GTTATCGCTT ACAACTTGAT AAAACACAAG ACATCGTTTT ACAAGGAAAT GGAGAGCTAA AGCCTTCGTT CGCAGATGGT TCGAGCAAAA GTGTTGAAGC TGAATTAGAA GAACTTTCAA ACATCATCAA AGATTTTAAT AACAAATACG CAAATATAGA CTTTAATGAA AGCGATAAAA TCGCTAAAAT CTTATACGAT ATAAAAGATG ATATAGCAAA AAATGAAAGA ATACGTGAAA CTTTTAGCAA ATCCGATATA CAAAATTCTC GTATCGAGTT TGATGCGCTT TTAAAAGATA AAATTCAAGA TATCTTGGAG TTAAATTTAG AACTTTTTAA ACAATTTAAT CAAAATATAG AATTTAAAGA CAAGATAGCA AATACCATGT TTAATATGGT TTGTAATGAT TTTTAA
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Protein sequence | MTNYKEKDLE NFIESYLLEN HAYIKRTNEN YDKNLCLDVE LFENFLQATQ SVALEELKKR CGQNYKKELF DRIFSQIKAK GIVKALQGYV EIKGIKIYLA FAKPNTNANE ESVKKYEQNT LSIIRQLYYS TQNKNSLDIV IFLNGLPLIT IELKNHFTGQ NVFHAIKQYK KDRNPKEAIF NYTIVHFALD HDLCYMSTKL DQDATTFLPF NLGLNNGSGK IGLANGAGNP PSDGIKTAYL WEKIFKKDTL LNLFFNFVQV VKKKNEEIII FPRYHQFDVV EKLLAHAKEN GTGQRYLIQH SAGSGKSNSI SWLAHNLVSL HRLEKNIFDS IIVVTDRKVL DSQIRENVKS FSQTKNLVEA ITHGSKQLKN ALEEGKKIII TTIQKFPFIL DEIKTLKSKT FAIIIDEAHS SQSGSNAQKM AEAIRDKSGD ESQNLDDEIL EIIKNKKLQS NASYFAFTAT PKPKTLEMFG MPCDVNGEQR FIPFHLYSMK QAIEEGFILD VLKGYTTYKS YYKIISCTND NPKYDKKRAN TKLKAYVQNN IKTIEQKSQI MCEHFFQNSF KKINGKAKAM IVTSSRENAV KYYLVFREYL RKNYPHFKAI VAFSGEVNLE GEIYSESGLN GFAENVLKDE FKKDEYRFLI VAEKYQTGFD EPLLHTMYVD KALSGVSAVQ TLSRLNRTCK NKENTFVLDF VNTHEDIAKS FSVFYEQTYL SEATDDNRIF DLKANLNEYE IYTQEEIDDF ANAILRKEKE NIIHAKLDIM LDRFNQKSDD EKLDFYNKAK TYLKEYSFLA QILPYEDIEL EKLYILLKKL ASKIILPKSE DLAKGILDNV DFDSYRLQLD KTQDIVLQGN GELKPSFADG SSKSVEAELE ELSNIIKDFN NKYANIDFNE SDKIAKILYD IKDDIAKNER IRETFSKSDI QNSRIEFDAL LKDKIQDILE LNLELFKQFN QNIEFKDKIA NTMFNMVCND F
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