| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJJ81176_0754 |
|---|
| Symbol | |
|---|
| ID | 4682317 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008787 |
|---|
| Strand | + |
|---|
| Start bp | 681231 |
|---|
| End bp | 682010 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 639853477 |
|---|
| Product | ABC transporter, permease protein |
|---|
| Protein accession | YP_001000427 |
|---|
| Protein GI | 121613458 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.855137 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAAA ATTTGAGTTT AAAAGCTAAA ATTTATCATT ATGCAGTTTT GTTTTTGGTT
TTTTTATTTT TAGCTTTGCC TTTAATGGCT ACTTTTTTAT ATTCTATTTC CACTTCTTGG
GGTGTAAGTG TTTTGCCTGA TGATCTTACG CTTAAATGGT ATCAAGAACT TTTTCATGAC
GAAAGATTTT TACTTGCTCT TTGGCATTCT TTGCTTGTTT GTGTGGGCAG TATTTTACTT
TCTGTGATTC TTGTTTTTCC TTTGGTTTTT GTGCTAAATT ATTATTTTTT AAAATTAAAA
GCCTTTGTAA ATATACTTAT TATCATGCCT TTTGCTGTAC CTCCTATAGT TAGCTGTGTG
GGGCTTTTGC AACTTTATGC TGACAATATA GGAGGCACAG CTTGGATACT CATTTTTACT
TATTTTACTA TAGCTTTGCC TTTTATATAT AGGGCTTTAG ATAATGCTAT GTCTAATGTC
AATTTAAATG AACTCATCGC ATCTAATGCT ATGCTTGGAG GTTCTTTAAT GGGAGCGATT
TTTAAGCTTG TCTTGCCTAA TTTAAGAAAT GGAATTTTGG TGGCAGTTTT TTTAAGTTTT
TCTTTTTTAA TAGGCGAATT TTTATACGCA AATATTCTTG TAGGAAGTGC TTATGAGACT
TTGCAAGTTT ATCTTTATAA TATCAAAAAT CAAAGTGGGC ATTATTCTAG TGCTTTGGTA
ATAGTTTATT TTGTGTTAAT TTTTATAACA ACTTTTATAG CTAGTTTGAT TAAGGAGTAA
|
|---|
| Protein sequence | MNENLSLKAK IYHYAVLFLV FLFLALPLMA TFLYSISTSW GVSVLPDDLT LKWYQELFHD
ERFLLALWHS LLVCVGSILL SVILVFPLVF VLNYYFLKLK AFVNILIIMP FAVPPIVSCV
GLLQLYADNI GGTAWILIFT YFTIALPFIY RALDNAMSNV NLNELIASNA MLGGSLMGAI
FKLVLPNLRN GILVAVFLSF SFLIGEFLYA NILVGSAYET LQVYLYNIKN QSGHYSSALV
IVYFVLIFIT TFIASLIKE
|
|---|
| |