Gene CJJ81176_0659 details

Gene Information

• Locus tag: CJJ81176_0659
• ID: 4682591
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter jejuni subsp. jejuni 81-176
• Kingdom: Bacteria
• Replicon accession: NC_008787
• Strand: -
• Start bp: 586391
• End bp: 588325
• Gene Length: 1935 bp
• Protein Length: 644 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 639853382
• Product: RNB-like protein
• Protein accession: YP_001000332
• Protein GI: 121612615
• COG category: [K] Transcription
• COG ID: [COG0557] Exoribonuclease R
• TIGRFAM ID: [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases; [TIGR02063] ribonuclease R

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.635937
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAAGAAT TTTTAAACAG TCTTAGTTAT GGCATTAGCT CTCACGAAGT AAGCAATGAA 
TTTAAACAAA TTTTAAGAGA GCTTTTAGCT AATCATATCA TCAAAGAACA CAAAAGCAAA 
TACTATCTTA ACAATGGTTT TGCCTTTGGA GTACTTGATA TTTCAAGCAA AGGCACAGGT 
TTTTTACAAT GCTTTGATGA AAGTTTCAAA AAAGATCTTT TGATAGAAAA CAAAAACCTA 
AAAGGTGCAA ACTATAAAGA TATAGTCGCA GTAAAACTTC TACCTTTAAA GAAAAAACGC 
CCCAGTGCAA AGGTGATTTT AGTTCTAAAA AGAGCCAATG AAACCTCTTT AGTGATCACC 
AAAAGGTACG GCGAAGCCGT GCTTGGAATG AATATCAAAA CAGGATTAAG CACTGCCTTA 
AAAGCTTCTC AAAAATCCTT AAAAGCACTA CCTTTAGGGA CAATTTTAAA AATAGAAAAT 
GAAAATAACA ATATCATAGA AGTTTTAGGA CATATCGATG ATGAAAGCGT AGATGAAAAA 
ATCTCCTTAG CTCTTTTTAA TAAAAATAAC GAATTTAGCG ACGCTTGCAT CAAAGAAGCT 
CTAGCAAACG GCGATAGTGT TGATGCGAGT ATGTATGAAA ATCGCATGGA TTTAAGAGCC 
TTGCCTTTTT GCACCATAGA TCCTATACAT GCAAAAGATT TTGATGATGC GATTTATTTT 
GACATCCAAA AACGAGAAAT TTATGTAGCT ATTGCTGATG TTAGCGAATA TGTTTATGCT 
TATAGTGCTA TAGATAAAGA AGCAAGAAAT CGTGGATTTT CTATTTATTT TCCACATATT 
GCTATACCTA TGCTACCTCG TCCTTTAAGT GAAAATATCT GTTCTTTAAA ACCTCATTTA 
GATCGCTTAG CGTATTGTTT TAAAATCGCA CTCGATCATG AAAATAAGGT CATAAAAGAA 
GAACTTTTTG AAGGTATTAT CAACTCAAAA CGCCGTTTTA ATTACGATGA AGTTGATGAA 
ATTTTGATAC AAAAACCTGA TTTAAAAGAG CTTTCATGGC TTTATGAGCT TTTTGAAATC 
ACAAAAAATT TACGCAAAAT GCGTCTTAAA AATGCCTTTG AATTTCGCAC CGAAGAATTA 
AGAATGAATT TAGATGAAAA TTTAAGTCTA AAAAGCACAG TTTTTGAAAA AGACACGCCT 
TCGCATAATT TAATCGAAGA TTGTATGCTT TTAGCTAATA AAGCCGCAGC AAAACTCATA 
GATATAGGTG TTTTTAGGAA TCACTTAAGT GCTGATGCAA GAAAAATCGA TAAGCTTTTA 
AATGAATTAC GCGAACTAGG CATCGATGTA AATTTTAAAC CCAATCTTCC TGAACTCATA 
CGCGACATAC AAGCTTTATC CGATGAGTTA AATTTAAGAG CAGAAGTAGA TAAACTCATC 
ATCAAAGCAC AAAAAAAAGC GGAATACTCT AGCATAAATG CGGGGCATTT TGGCTTAGGT 
TTTGATAAAT ACTCACATTT TACAAGCCCT ATAAGAAGGT ATTCTGATCT TATTTTACAC 
AGACTTTTAA AAGCCAAACA AAAAAACGAT GAAAAACTTT TTAATTATCT ACTTTTAAAC 
ATAGAAAGCA CTTGCGAGAG TCTTAGTACG CTTGAAAGAG AGGCGGATAA GGTTGCTTTT 
GATTTTATGG ATAGAAAATT TGCTAGATGG GCAGCTAAAA ATATAGGCAA AAAATTTAAA 
GCTTTAGTTG TGCAAAATGA TGGAGTTTGC ATAGCTAAAC TAGATGATGA AATCAAAGGA 
GCAGATATAA TCCTTTATGA TACACGTGTG AATTTGCTAG AAAGTGTTGA AGTGCAAATC 
ATGGAAGCTG ATATAGTTAT GGCAAAAATT TATGCTAAAA TCACCCAAAG ACTTATAAAG 
GAAGAAAATG TATAG 

 

Protein sequence

MKEFLNSLSY GISSHEVSNE FKQILRELLA NHIIKEHKSK YYLNNGFAFG VLDISSKGTG 
FLQCFDESFK KDLLIENKNL KGANYKDIVA VKLLPLKKKR PSAKVILVLK RANETSLVIT 
KRYGEAVLGM NIKTGLSTAL KASQKSLKAL PLGTILKIEN ENNNIIEVLG HIDDESVDEK 
ISLALFNKNN EFSDACIKEA LANGDSVDAS MYENRMDLRA LPFCTIDPIH AKDFDDAIYF 
DIQKREIYVA IADVSEYVYA YSAIDKEARN RGFSIYFPHI AIPMLPRPLS ENICSLKPHL 
DRLAYCFKIA LDHENKVIKE ELFEGIINSK RRFNYDEVDE ILIQKPDLKE LSWLYELFEI 
TKNLRKMRLK NAFEFRTEEL RMNLDENLSL KSTVFEKDTP SHNLIEDCML LANKAAAKLI 
DIGVFRNHLS ADARKIDKLL NELRELGIDV NFKPNLPELI RDIQALSDEL NLRAEVDKLI 
IKAQKKAEYS SINAGHFGLG FDKYSHFTSP IRRYSDLILH RLLKAKQKND EKLFNYLLLN 
IESTCESLST LEREADKVAF DFMDRKFARW AAKNIGKKFK ALVVQNDGVC IAKLDDEIKG 
ADIILYDTRV NLLESVEVQI MEADIVMAKI YAKITQRLIK EENV