Gene CJJ81176_0616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCJJ81176_0616 
SymboltlyA 
ID4682406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. jejuni 81-176 
KingdomBacteria 
Replicon accessionNC_008787 
Strand
Start bp545145 
End bp545906 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content26% 
IMG OID639853339 
Producthemolysin A 
Protein accessionYP_001000289 
Protein GI121612817 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.516871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTTG ATTTTTTTGT TTCAAAGCGT TTAAATATCA GTAGAAATAA AGCTTTAGAG 
CTTATAGAAA ATGAAGAGGT TTTGCTTAAT GGTAAAAGTT TTAAAGCTTC TTTTGATGTG
AAAAATTTTT TAGAAAATTT AAAAAAAACG CAAGATTTAA ATCCTGAAGA TATACTTTTA
ACTGATGGGT TAAAATTGGA TCTTTTAAGT GAAATTTATG TTTCAAGGGC GGCTTTAAAA
TTAAAAAATT TTTTAGAAGA AAATGGTATT GAAATAAAAC ATAAAAATTG TCTTGATATA
GGATCTAGTA CGGGTGGTTT TGTGCAAATT TTACTTGAAA ATCAGGCTTT AAAAATCACT
GCTCTTGATG TAGGTAACAA TCAACTCCAT CTAAGTTTAA GAACAAATGA AAAAATTATC
TTGCATGAAA ATACAGATCT TAGAACCTTT AAAAGTGAAG AAAAATTTGA ACTTATTACT
TGTGATGTGA GTTTTATTTC TCTTATTAAT TTACTTTATT ATATCGATAA TTTAGCTTTA
AAGGAAATTA TCTTACTTTT TAAGCCTCAG TTTGAAGTAG GGAAAAATAT CAAAAGAGAT
AAAAAGGGTG TTTTAAAAGA TGATAAGGCA ATCTTAAAGG CAAGAATGGA TTTTGAAAAA
GCATGTGCTA AATTGGGTTG GCTTTTAAAA AATACGCAAA AATCAAGCAT TAAAGGAAAG
GAAGGTAATG TTGAATATTT TTACTACTAT ATCAAAAATT AA
 
Protein sequence
MRFDFFVSKR LNISRNKALE LIENEEVLLN GKSFKASFDV KNFLENLKKT QDLNPEDILL 
TDGLKLDLLS EIYVSRAALK LKNFLEENGI EIKHKNCLDI GSSTGGFVQI LLENQALKIT
ALDVGNNQLH LSLRTNEKII LHENTDLRTF KSEEKFELIT CDVSFISLIN LLYYIDNLAL
KEIILLFKPQ FEVGKNIKRD KKGVLKDDKA ILKARMDFEK ACAKLGWLLK NTQKSSIKGK
EGNVEYFYYY IKN