Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJJ81176_0539 |
Symbol | ctpA |
ID | 4683664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
Kingdom | Bacteria |
Replicon accession | NC_008787 |
Strand | + |
Start bp | 475105 |
End bp | 476439 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 639853262 |
Product | carboxyl-terminal protease |
Protein accession | YP_001000214 |
Protein GI | 121613476 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.206911 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGAGC TTATTTTGAA AACAAAACGA TTTTTTGCGG GTCTTGCAGG CTTTGCCACT ACTTTCATTT TATGTCTATT TTTAACAAGT CATTTACAAG CTAAAGTTGA TCAAAAAGAA GAGCAGGTTC AAAAACGCCT AGAAGCTTTA GATAAGCTTA CAAAAACTCT TGCTATAATA GAGCAATACT ATGTGGATGA TCAAAATATC AGCGATTTGG TGGATAAATC TTTATCAGGG CTTTTAAGCA ATCTTGATGC GCATTCTTCT TTTTTAAATG AAAAAGATTT TAATGATATG AAAATTCAAA CCAATGGCGA ATTTGGTGGC CTTGGTATAA CCGTAGGTAT GAAAGATGGC GCTTTAACAG TTGTTTCTCC TATAGAAGGA ACACCAGCAG ATAAAGCAGG GATAAAATCA GGAGATATTA TTTTAAAAAT TAATGATGAG GCCACTTTGG GAATTAATCT CAATGATGCT GTAGATAAAA TGCGTGGTAA GCCAAAAACT CAAATCACTT TAACCATCTT TAGAAAAGGT GCAACAAAAC CTTTTGATGT TACACTTACA AGAGAAATTA TTAAGATAGA AAGTGTTTAT GCAAAAATGA TAGAAAATGA AAACATTCTT TATCTTAGAG TTACAAATTT TGATAAAAAT GTTGTAGATG TGGCAAGTAA AGAACTTAAA AAATATCCTA ATGTTAGAGG GGTTATTTTA GATCTTAGAA ATAATCCTGG TGGACTTTTA AATCAAGCTA TAGGACTTGT AAATTTATTT GTAGATAAAG GTGTTATTGT TTCTCAAAAA GGACGCATCA CAAGTGAAAA TCAAGAATAT AAAGCCGATC CTAAAAACAA AATTTCTGAT GTTTCTTTGG CTGTGCTTGT AAATGGTGGA AGTGCTAGTG CAAGTGAAAT CGTAAGTGGA GCTTTACAAG ATCTTAAACG CGGTGTTATT GTGGGTGAGA ATACTTTTGG AAAAGGTAGT GTTCAACAAA TCATACCTAT TAATAAAACT GAAGCTTTAA GGCTTACTAT CGCAAGATAT TATCTTCCAA GCGGACGTAC TATTCAAGCA GTGGGTGTAA AACCTGATAT TGAAGTTTTT CCAGGTAAAG TAAATACTCA AGAAGATGGT TTTTCTATAA AAGAAAGCGA CTTAAAACAA CATTTAGAAA GTGAGCTTGA AAAAATAGAT AAAAATAAAA AAGAAGATAA ACAAGAAAAT AAAGACAATA AAAATCTAAT CAGTCAAAAA CAAATCAATG ATGACGCACA GTTAAAATCG GCTATTGATA CTATTAAAAT TTTAAATATC AAACAAGGAC AATAA
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Protein sequence | MMELILKTKR FFAGLAGFAT TFILCLFLTS HLQAKVDQKE EQVQKRLEAL DKLTKTLAII EQYYVDDQNI SDLVDKSLSG LLSNLDAHSS FLNEKDFNDM KIQTNGEFGG LGITVGMKDG ALTVVSPIEG TPADKAGIKS GDIILKINDE ATLGINLNDA VDKMRGKPKT QITLTIFRKG ATKPFDVTLT REIIKIESVY AKMIENENIL YLRVTNFDKN VVDVASKELK KYPNVRGVIL DLRNNPGGLL NQAIGLVNLF VDKGVIVSQK GRITSENQEY KADPKNKISD VSLAVLVNGG SASASEIVSG ALQDLKRGVI VGENTFGKGS VQQIIPINKT EALRLTIARY YLPSGRTIQA VGVKPDIEVF PGKVNTQEDG FSIKESDLKQ HLESELEKID KNKKEDKQEN KDNKNLISQK QINDDAQLKS AIDTIKILNI KQGQ
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