Gene CJJ81176_0477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCJJ81176_0477 
Symbol 
ID4682411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. jejuni 81-176 
KingdomBacteria 
Replicon accessionNC_008787 
Strand
Start bp419301 
End bp420062 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content30% 
IMG OID639853201 
ProductDNA polymerase III subunit epsilon 
Protein accessionYP_001000159 
Protein GI121612917 
COG category[L] Replication, recombination and repair 
COG ID[COG2176] DNA polymerase III, alpha subunit (gram-positive type) 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.387234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTTTAC AGCAAATTGA TCAGATTATT TCTATATTAA ATAAGCAAAG CAAGCCTTAT 
GATTGGGTGA TGCAAGAGTT TGCCAAAGTT GAAGAATTAA AAAATTTTGA TTTAGATTTG
GAAACTTTTG AGCTTTTGGG TTTGGGTTTA ACTTTGAATA AAGATAATAT TTTTACCCTT
AAAACACGCA CAACAAAAAT TAAAGATGAA ATTTTTTGCA TAGTAGATAT AGAAAGTACT
GGTGGTGTAA GTAAGGGGGA AATTTTAGAA ATTGGAGCAG TAAAAATTCA AAATTCTAAA
GAAATTGCAC GCTTTCAAAG TTTTGTTAAA GTAAAAGAAA TTCCAGAAAA TATAACCGAA
CTTACGGGTA TTACTTATGA GATGGTGGAA AATGCTCCAA GTTTAGCAAA GGTTTTAAGT
GATTTTAGGC TTTTTTTAAA AGACAGTATT TTTGTAGCGC ATAATGTGCG TTTTGATTAT
AGTTTTATTT CTAGGGCTTT AAATGAGTGT GGTTTTGGCA TTTTGCTTAA TCGTCGTATT
TGCACTATAG AATTTGCACA ATGTTGTATA GAAAGTCCAA AATATAAACT AGAGGTTTTG
AAAGAATTTC TGGGCGTGGA AAATACGCAT CATAGGGCCT TAGATGATGC TTTAGCAGCT
GCTGAAATTT TTAAATATTG CCTTGGAAAA CTTCCTTATC ATATAAAAAC TACAGAAGAA
CTTATAAATT TTACAAAGAC TGCACGCATA AAGCAAAAAT AA
 
Protein sequence
MSLQQIDQII SILNKQSKPY DWVMQEFAKV EELKNFDLDL ETFELLGLGL TLNKDNIFTL 
KTRTTKIKDE IFCIVDIEST GGVSKGEILE IGAVKIQNSK EIARFQSFVK VKEIPENITE
LTGITYEMVE NAPSLAKVLS DFRLFLKDSI FVAHNVRFDY SFISRALNEC GFGILLNRRI
CTIEFAQCCI ESPKYKLEVL KEFLGVENTH HRALDDALAA AEIFKYCLGK LPYHIKTTEE
LINFTKTARI KQK