Gene CJJ81176_0404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCJJ81176_0404 
SymbolpyrF 
ID4682606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. jejuni 81-176 
KingdomBacteria 
Replicon accessionNC_008787 
Strand- 
Start bp351131 
End bp351811 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content30% 
IMG OID639853129 
Productorotidine 5'-phosphate decarboxylase 
Protein accessionYP_001000092 
Protein GI121613342 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0284] Orotidine-5'-phosphate decarboxylase 
TIGRFAM ID[TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTTT GTGTCGCACT TGATCTTTCT ACAAAAGAAG AATGCTTGCA ACTTGCTAAA 
GAATTAAAAA ATTTAGACAT ATGGTTAAAA GTAGGTTTAA GAGCATATTT AAGAGATGGT 
TTTAAATTCA TAGAAGAACT TAAAAAAGTT GATGATTTTA AAATATTTCT TGATCTTAAA 
ATTCATGATA TTCCCAACAC TATGGCAGAT GCTTGCGAAG AAATATCAAA ACTTGGTGTT 
GATATGATCA ATATCCACGC AAGTGCTGGA AAAATAGCTA TGCAAGAAGT TATGACACGG 
CTTAGCAAAT TTTCAAAAAG ACCTTTAGTT TTAGCAGTTT CTGCTCTTAC GAGTTTTGAT 
GAAGAAAATT TCTTTAGTAT TTATAGACAA AAAATCGAAG AAGCTGTAAT TAATTTTTCA 
AAAATATCCT ATGAAAATGG ACTTGATGGT ATGGTATGCT CTGTTTTTGA AAGTAAAATC 
ATCAAAGAAC ACACTCAAAG AAATTTCCTA ACTCTCACTC CAGGAATTCG TCCATTTGGA 
GAGAAAAATG ATGATCAAAA ACGCGTCGCT AATTTAACAA TGGCTAGAGA AAATTTAAGC 
GATTTTATAG TAGTTGGACG CCCTATTTAT AAAGATAATA ACCCTAGAAA AATTTGCGAA 
AAAATTCTAC AAGAAATTTA A
 
Protein sequence
MKLCVALDLS TKEECLQLAK ELKNLDIWLK VGLRAYLRDG FKFIEELKKV DDFKIFLDLK 
IHDIPNTMAD ACEEISKLGV DMINIHASAG KIAMQEVMTR LSKFSKRPLV LAVSALTSFD 
EENFFSIYRQ KIEEAVINFS KISYENGLDG MVCSVFESKI IKEHTQRNFL TLTPGIRPFG 
EKNDDQKRVA NLTMARENLS DFIVVGRPIY KDNNPRKICE KILQEI