| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJJ81176_0340 |
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| Symbol | fliF |
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| ID | 4683375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008787 |
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| Strand | + |
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| Start bp | 292478 |
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| End bp | 294160 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 639853065 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_001000028 |
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| Protein GI | 121612614 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTTA AAAATATGCT TCATCAAATT GGGCAACTTT ATCAAAATTT AACTCGCAAG
CAGCGTATAG TGATTGCTGC ATCTATTGTA GTAGTGGTTG GGTTTTTGGT TTTTTTAGCT
TTATTTCGTG GAAGTGGTAG TAATGCAAAT AATGGATATG CAGTTTTAGT TGAAAATGTA
AGCCCAAGTT CTTCTGCTGC AATTGTAGCT AAACTTGAAC AAAATAATAT TCCCTATAAA
TTAGAAAGTG AAAATAAAAT TTTAGTTCCA CAAGATCAGG TTTATCGTCA AAGAATGTTT
ATTGCAAGCG AAGGTCTTAT AAAAGATAGT CGCGTGGGTT TTGAAGCTTT TGATACTCAA
GCTTTTGGAG CTACAAATGA AGAGCAAAAA GTAAAATACC AAAGAGCCAT AGAAGGTGAA
CTTGCAAGAA CTATTGAGAC TTTAGAACCT ATTCGTAGTG CTGTTGTGCA TATAGCATTT
CCTAAAGATA GTGTTTTTAC TGAAAGGCAA ATTCCGCCTA CAGCTTCAGT TGTTGTTAAT
GTTCGCGAAG GCTTAAAGCT TACTAGAAAA CAAATTGATG GTATAAAAAA TATTGTTTCA
GCGGCAGTTC CAAAACTTAC TAAAGAAAAT GTTAAGATTA GTGATCAAAG TGGCGTGCCT
TTAGATGAGC AAGAAGCATA TGAAGATGAC TTGGTTCGTG TGCAAATTAA ATTTAAAAGT
GATCAAGAAA AAGCTTTAGA AGATAAGATT ATAGAAAATT TAGCTCCTTT TGCAGGTGGT
ATGGATAAAG TAAAAGTGAG TGTAAATATA GATTTTGATT TTTCCAAGCA AGAATCTCAA
AGTGAAATTT ATGATCCAAA TCCTATAGTG CGTAGTGAGC AAACTTTAAA CGAGGAAAGA
ACAGGTAGAA AAGATCCAGA AATTCAGGGT GTTCCAGGTG CTGTTTCTAA TATAGGTCCT
GTTGAAGGAC TTGACAATAA AGGTCAAATT GACACTTATA AAAAAAATCA AGTTACTACA
AACAATGAAC TTTCTAAAAC TATCACAAAT ACAAAAAAAC AATTTGCAAC AGTTTTACGC
ACTTCAGCAG CTGTCACTAT AGATGGAAAA TATCAAGATG TGGTTGATGA AAATGGGGAT
GTGAAAAGCG AATATGTTCC ATTGACTAAA GAAGAGCTTG CAAGTGTTGA GAGTATAGTT
AAAAATACTA TTAATTTTAG CGCTACTAGA GGTGATAGTG TTGTAGTGCA AAATTTACCA
TTTCATCGTG AGTCGATTAG AGTTGAGAGT AAAGTTAAAA CTTTTTACAA TCGTTTTGTT
GAGCCATTTA TTCCACCAGT TAAGTATTTT ATTGCAGCGA TTTTACTTTT TATTTTTTAC
AAAAAAGTCA TTGCTCCATT TACTCAAAAA ATGCTTGAAG ATGTCGCAGC GCAAGAAGAA
ATGCAGCAAG GTCCAAATGC TGTTTTAGAT GATGCTGAAG ATGCTTTGGA AAAATTTAAT
GCAGCAAGGA AAAAAGTTGA AGAACAACTT GGTTTTGGGG ATAATTTTAA TGAAGATTCT
ATTCAATATG AGGTTTTACT TGAAAAATTG CGTGGTTTAG TAAGTGATAA AGGCGAGGAA
ATTGCAGCAC TTTTACAAAA CTTAATTCAA AATGATAGTG AATTTGGCGA AAAGGATATG
TGA
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| Protein sequence | MDFKNMLHQI GQLYQNLTRK QRIVIAASIV VVVGFLVFLA LFRGSGSNAN NGYAVLVENV
SPSSSAAIVA KLEQNNIPYK LESENKILVP QDQVYRQRMF IASEGLIKDS RVGFEAFDTQ
AFGATNEEQK VKYQRAIEGE LARTIETLEP IRSAVVHIAF PKDSVFTERQ IPPTASVVVN
VREGLKLTRK QIDGIKNIVS AAVPKLTKEN VKISDQSGVP LDEQEAYEDD LVRVQIKFKS
DQEKALEDKI IENLAPFAGG MDKVKVSVNI DFDFSKQESQ SEIYDPNPIV RSEQTLNEER
TGRKDPEIQG VPGAVSNIGP VEGLDNKGQI DTYKKNQVTT NNELSKTITN TKKQFATVLR
TSAAVTIDGK YQDVVDENGD VKSEYVPLTK EELASVESIV KNTINFSATR GDSVVVQNLP
FHRESIRVES KVKTFYNRFV EPFIPPVKYF IAAILLFIFY KKVIAPFTQK MLEDVAAQEE
MQQGPNAVLD DAEDALEKFN AARKKVEEQL GFGDNFNEDS IQYEVLLEKL RGLVSDKGEE
IAALLQNLIQ NDSEFGEKDM
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