| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJJ81176_0336 |
|---|
| Symbol | lysA |
|---|
| ID | 4683355 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008787 |
|---|
| Strand | + |
|---|
| Start bp | 288304 |
|---|
| End bp | 289512 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 639853061 |
|---|
| Product | diaminopimelate decarboxylase |
|---|
| Protein accession | YP_001000024 |
|---|
| Protein GI | 121612594 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0019] Diaminopimelate decarboxylase |
|---|
| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTATA AACAATTAAA ACAAGAATTT AATACCCCTT TTTATATTTA CAATTTTGAT
TTCATAAAAG AGCGTTTTTT AAATCTCAAA GAGGCTTTTA AGGCTAGAAA ATCTCAAATT
TTTTACGCTG TAAAAGCCAA TTCAAATTTA AGTTTGTTGC AAATGCTTGC AAATTTAGAT
AGTGGATTTG ATTGTGTGAG TATAGGCGAG GTAAAGCGTG CCTTAAAAGC AGGAGCAAAA
GCTTATAAGA TTATTTTTAG TGGAGTAGGA AAAACCAAAG AAGAGTTAAG ACAAGCTTTA
GAATATGATA TTTTATATAT TAACCTTGAA AGCGAAGCTG AAATGATGCT TTTAGAAAGT
GTGGCTAAAG AACTTAATCT AAAGGCAAGA ATCAGTATTC GTGTTAATCC AAATGTTGAT
GCAAAAACTC ATCCTTATAT TTCTACAGGA TTAAATGAAA ATAAATTTGG TGTCGAAATT
GATATAGCAA GAAAAATGTA TCTTTATGCA AAAAATTCAT CTTTTTTAGA GCCTGTTGGA
GTGCATTTTC ATATAGGTTC GCAACTTTTA GATATTTCTC CCATTCATGA AGCAGCAGGC
ATCGTTGCAA AACTTGTAAG AGAGTTAAAA GCCTTGCAAA TCGATCTTAA ATTTTTTGAT
ATAGGCGGTG GTTTGGGTGT GGCTTATGAA AAAGATGAGT GTGAATCTGA TCTTTATGAT
TATGCACAAG GTATATTAGC ACAACTTCAT GGGCTTGATT TAACTATAGG AATGGAGCCT
GGAAGGTATC TAGTTGCTAA AAGTGGAGAA TTTGTTTGTT CAGTGCTTTA TGAAAAACAA
AATAAAACCA AGCGTTTTGT TGTAGTAGAT GGAGCGATGA ATGATCTTAT ACGCCCAAGT
TTATACGAGG CTTATCATGA AATAATCTTA CCTTATAATC AAGCTCAAGA GAGTTTATGT
GATGTTGTAG GTGGAATTTG TGAGAGTGGA GACTTTTTTG CTAAAGCAAG GTCTTTACCT
AGCACTCAAA GTGGCGATAT AATGGTTATT AAAAATACTG GAGCTTATGG TTTTAGTATG
AGTAGTAACT ACAATACTCG TAATAAAGTT TGCGAATTAG CCCTTGAAGA AGGACAGGTA
AGATTGATCC GTCAAAGAGA AAATTTTGAA AATCAAATCG CTTTAGAAGA GAAATTTTTA
AAGGCTTAA
|
|---|
| Protein sequence | MDYKQLKQEF NTPFYIYNFD FIKERFLNLK EAFKARKSQI FYAVKANSNL SLLQMLANLD
SGFDCVSIGE VKRALKAGAK AYKIIFSGVG KTKEELRQAL EYDILYINLE SEAEMMLLES
VAKELNLKAR ISIRVNPNVD AKTHPYISTG LNENKFGVEI DIARKMYLYA KNSSFLEPVG
VHFHIGSQLL DISPIHEAAG IVAKLVRELK ALQIDLKFFD IGGGLGVAYE KDECESDLYD
YAQGILAQLH GLDLTIGMEP GRYLVAKSGE FVCSVLYEKQ NKTKRFVVVD GAMNDLIRPS
LYEAYHEIIL PYNQAQESLC DVVGGICESG DFFAKARSLP STQSGDIMVI KNTGAYGFSM
SSNYNTRNKV CELALEEGQV RLIRQRENFE NQIALEEKFL KA
|
|---|
| |