Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJJ81176_0277 |
Symbol | |
ID | 4682155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
Kingdom | Bacteria |
Replicon accession | NC_008787 |
Strand | - |
Start bp | 235965 |
End bp | 237275 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 639853002 |
Product | major facilitator superfamily protein |
Protein accession | YP_999965 |
Protein GI | 121613388 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCAAAA CCCTTAACCA AAAAGATATA AAAGTTTTAG GACTTTCATC ATTAGGTGGA ACTTTAGAAT TTTATGATTT TATTATTTTT GTATTTTTTG CAAATTATAT TTCAACAAAC TTTTTTCCAA AAGATTTAAG TAGTTTTTGG CAAATGTTTA ATACTTATGG AATATTTGCG GCTGGATATT TAACGCGTCC CTTAGGGGGT GTGATACTGG CACATTTTGG AGATAAATTT GGACGCAAAA GAATGTTTAT GATTAGTATT TTGTTAATGG TTATTCCAAC TTTTACTCTA GCTTTTATTC CAAATTATGA AAGCATAGGT TTTCTTTGTA TTGTGCTTTT AGTTTTTATA CGCATTTGTC AAGGCATTGC TATAGGTGGA GAACTTCCTG GAGCTTGGGT TTTTGTATAC GAACACGCAC CACAAGGTCA AAAAAGAACT TATTTGGGAA TTTTAACCGC TTCAGTTGTA GGTGGAATTT TATTAGGTAG TTTAGTTTTT TTAATTATGA ATAAAATTTA TACCCAAGAA GAACTTCATG AATGGGCTTG GAGAATTCCA TTCTTTTTAG GTGGAATTTT TGGGATTATT TCTGCTTATT TGAGAAAATT TTTAAGAGAA ACTCCTGTTT TTGAACAAAT GAAAAAAGAC AAGGCTTTAG AAAAATTTCC TTTAAAAGAA GTGTTTAAAA AAGCTAAAAT GGGAATTGTT CTTTCCATGA TGATTACTTG GGTTTTGACA GGTTGCATTG TTGTAATGAT TTTGCTTATG CCTAGCTATA TGGCAAAAAT ACTTCAAATT AACACTTCTA TACAAACCTA TCTTCAAATA GGTGGAATTT TACTTATTTG CCTAGGGTGT ATTATAAGTG GAATTTTAGC GGATAAAATA GGCATTATCA AATCTTGTGT ATTTTTTAGT GTTTTTTTTG GAATTGTAAG CTTGCTTTAT TTTAATACTC TATATAGACA AAATGCTGAT TTTAACCTAG TAGCTTGCTT ATATTTACTT GTATGTTTTT TTAGCGGAGT GATGAATTTT TGTCCTTTAA TAATGAGTGA AGTATTTGAT GCAAAAATTA AATTTTCAGG ACTTTCTTTT TCATATAATA TTGCTTATGC TATAGCTGGA GGTTTAACTC CGCAACTTGC TTTTTTCTTA CATAGTTTTG CCTTAGATAA TTTAAGTAAT TTTTGGCGTT TTTCTTTGGG GATTTATGTT TTCTTTTTGG CTATTATAGC TTTGCTATGT GCATTTATTT TTTCTTATCT TAATAATACC CAACGCACAT ACTCTCAGTG A
|
Protein sequence | MSKTLNQKDI KVLGLSSLGG TLEFYDFIIF VFFANYISTN FFPKDLSSFW QMFNTYGIFA AGYLTRPLGG VILAHFGDKF GRKRMFMISI LLMVIPTFTL AFIPNYESIG FLCIVLLVFI RICQGIAIGG ELPGAWVFVY EHAPQGQKRT YLGILTASVV GGILLGSLVF LIMNKIYTQE ELHEWAWRIP FFLGGIFGII SAYLRKFLRE TPVFEQMKKD KALEKFPLKE VFKKAKMGIV LSMMITWVLT GCIVVMILLM PSYMAKILQI NTSIQTYLQI GGILLICLGC IISGILADKI GIIKSCVFFS VFFGIVSLLY FNTLYRQNAD FNLVACLYLL VCFFSGVMNF CPLIMSEVFD AKIKFSGLSF SYNIAYAIAG GLTPQLAFFL HSFALDNLSN FWRFSLGIYV FFLAIIALLC AFIFSYLNNT QRTYSQ
|
| |