| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_5011 |
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| Symbol | trmE |
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| ID | 4693745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 5562675 |
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| End bp | 5564147 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639852746 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_999715 |
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| Protein GI | 121611908 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.323736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGCGGC ATGACCCCAT CGTGGCCATC GCCAGCGCTG CCGGACGCGG GGCGATCGGC
ATCGTGCGGG TCTCGGGCAA CGCGCTCGGC GCGCTGGCGC AGGCCCTGTG CGGGCGCGCG
CTCCAGCCGC GCATGGCGAC CTACCTGGCT TTTCGCGACG CCCGGGGGCA GCCCATCGAC
CAGGGGCTGG CGCTGTACTT TCCAGGCCCG CACAGCTACA CCGGCGAAGA TGTGCTGGAG
TTGCAAGCCC ATGGCGGGCC GGTGGTGCTG CAACTGCTGC TGGCGCGCTG CCTGGAGGCC
GGCGCCGGCG CTGATCCGGC CACCGGGCGG CCCTGCCTGC CCGGGCTGCG GCTGGCGCAG
CCGGGAGAGT TCACCGAGCG CGCCTTCCTC AACGACAAGA TCGACCTGGC CCAGGCCGAG
GCCATTGCCG ACCTGATCGA CGCCAGCACC GAGGCGGCGG CGCGCAGTGC CAGCCGGTCG
CTCAGCGGGG CCTTTTCCGC CGGAATTCAT GGCCTGTGCG ATGCGCTGAT AGCGCTGCGC
ACGTTGGTCG AGGCCAGCCT CGACTTTCCG GAAGAGGAGA CCGATTTCCT GCACCAGGCC
GACGCGCGCG GACAACTGTC GAGACTGCGG CAAGCGCTGG GCGCGGTGCT GCAACAGGCG
CGCCAGGGCG CATTGCTGCG CGATGGCATC GAGGTGGTCA TTGCCGGCCA ACCGAATGCG
GGCAAGAGCT CGCTGCTCAA CGCGCTGGCC GGGGCCGAGT TGGCCATCGT CACGCCGGTG
GCGGGCACCA CCCGCGACAA GGTGCAGCAG ACCATACAGA TCGAGGGCGT GCCGCTGCGC
ATCATCGACA CGGCCGGCTT GCGCGCCAGC GACGATGAGG TCGAACGCAT CGGCATCGCG
CGCAGTTGGG AGGCGATGGC CGCTGCCGAT GCCGTGCTGT TCCTGCACGA CCTGGCGCGC
GCGCAGACGC CAAAATACAT CGCTGACGAC GCCGAAATAG AACGCGCGCT GGCCCGGAAG
CTGCCTCCAG GCGTTGCCGT GATCGATGTC TGGAACAAGC TCGACTGCGT TGCCGCTCCG
GCCGAATTGG CCGCACCGAC CGCACCGACC GAATCGGCCG CCGTACCCCC CGCATCCGCC
CGCCCTGCAC CTGCCCCGCG CCCGGCGGTG CAACTGTCGG CCCGCACCGG TCAGGGGCTC
GATGGCTTGC GGCGCATCCT GCTGGAGGTG GCGGGCTGGC AATCGGTCCC CGAGGGCATT
TGCATCGCCC GCGCCCGGCA TGTCCAGGCG CTGCAAATGG CGGCGGCCCA TTTGGAGCAA
GCCGCAGACC AGTTGCAGGC CCGGGGTGCG GCGCTGGAAC TGCTGGCCGA AGAACTGCGG
CTGGCGCAAA ACGCGCTCGA CAGCATCACC GGCGCGTTCA CCAGCGACGA CCTGCTCGGG
GCCATCTTCG CGCGCTTTTG CATCGGCAAA TAG
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| Protein sequence | MRRHDPIVAI ASAAGRGAIG IVRVSGNALG ALAQALCGRA LQPRMATYLA FRDARGQPID
QGLALYFPGP HSYTGEDVLE LQAHGGPVVL QLLLARCLEA GAGADPATGR PCLPGLRLAQ
PGEFTERAFL NDKIDLAQAE AIADLIDAST EAAARSASRS LSGAFSAGIH GLCDALIALR
TLVEASLDFP EEETDFLHQA DARGQLSRLR QALGAVLQQA RQGALLRDGI EVVIAGQPNA
GKSSLLNALA GAELAIVTPV AGTTRDKVQQ TIQIEGVPLR IIDTAGLRAS DDEVERIGIA
RSWEAMAAAD AVLFLHDLAR AQTPKYIADD AEIERALARK LPPGVAVIDV WNKLDCVAAP
AELAAPTAPT ESAAVPPASA RPAPAPRPAV QLSARTGQGL DGLRRILLEV AGWQSVPEGI
CIARARHVQA LQMAAAHLEQ AADQLQARGA ALELLAEELR LAQNALDSIT GAFTSDDLLG
AIFARFCIGK
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