| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_5007 |
|---|
| Symbol | |
|---|
| ID | 4694940 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 5557038 |
|---|
| End bp | 5559479 |
|---|
| Gene Length | 2442 bp |
|---|
| Protein Length | 813 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639852742 |
|---|
| Product | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
|---|
| Protein accession | YP_999711 |
|---|
| Protein GI | 121611904 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGCG AACCCCAACC CTGTCCCGAC CTCGGCTTGC AGCCCATCAG CCAGGATGTG
CTGTGCGAGA AATACCTCAA GCCCGGTGAA ACCACGGCGC AAATGCTCTA CCAGCGCGTG
GCGCGGGCCT TGGCGTCGGT GGAAGCCCCG GAACTGCGCA GCCGATACGA GGCCCTGTTC
CTGGCCAACC TGCAAGCCGG AGCGATTGGC GCGGGCCGCA TCATGAGCGC CGCCGGCACC
GACATCCAGG CCACGTTGAT CAACTGCTTC GTGCAGCCGG TGGGCGACTG CATACAGGGC
CAGGACGAGG ACGGCTTTCC CGGCATCTAC GAGGCGCTGC GCGAGGCGGC CGAGACCATG
CGGCGCGGCG GCGGCGTGGG CTACGACTTC TCGCGCATCC GGCCCAAGGG CGCGCGGGTC
ATGGCCACGG CGTCGATGGC CTCGGGGCCT TGCAGCTACA TGAACGTGTT CGACCAGTCC
TGCGCCACCG TGGAGAGCGC CGGCGCGCGC CGGGGCGCGC AAATGGGCGT GCTGCGCATA
GACCACCCCG ATGTGCACGA ATTCATCAGC GCCAAGCGCC AGCCGGGCCG GTGGAACAAC
TTCAATGTGT CGGTGAGCGT GCCCGATGCG TTCATTCAGG CGCTGCAAGA CGACGCTGCC
TGGGATCTGG TGCACAAGGC CCGCCCCGGC GCCGCCTTGC TGGCCCAGGG CGCGCACCAG
CGCGCCGACG GCCAGTGGGT CTATGCCAGC GTGCCGGCGC GCGCGCTGTG GGAGCGCATC
ATGCGTTCGG CCTACGACTA TGCCGAGCCG GGCATCCTGT TCCTGGGCCG CATCAACGAG
GACAACAACC TACATTACTG CGAGACCATC ACGGCCACCA ACCCCTGCGG CGAGCAGCCC
CTGCCCGCCT ATGGCTGCTG CGACCTGGGC CCCGTCATCC TGCCCCGCTT CGTGCGCCAC
CCTTTTGGCT TTGGCGGTGC CGCGGCTTTC GACTTCGAGG CTTTCGCGCA GGCCGTGGCG
TTGCAGGTGC GGGCGCTGGA CAATGTGCTC GACCTGACCT ATTGGCCGCT GCCGCAGCAG
CGCGAGGAGG CCATGGCCAA GCGCCGCATC GGGGTGGGCT TTACCGGCCT GGGCAACACG
CTGGCCATGC TGTGCCTGCG CTACGACCGG CCCGAGGGCC GCGCCATGGC GGTGCGCATT
GCCCGGTGCA TGCGCGATGC CGCTTATCGC GCGTCGGTCG ACCTGGCACG CGAGAAAGGG
GCCTTCCCCC ACTTTTCTGC CGGGCCGTAC CTGGCCGAGG GCCGTTTTGC CAGCCGCCTG
CCCGAGGCGC TCAAGGCCGC GATCCGCCAG CATGGCATCC GCAACAGCCA TCTGCTGTCG
ATCGCCCCCA CCGGCACCGT CAGCCTGGCT TTTGCCGACA ACGCCTCCAA CGGCATCGAG
CCTTCGTTCG CGTGGACCTA CAAGCGCAAA AAACGCGCGG CCGACGGCGG CAGCACCGAG
TACGCGGTGC AAGACCATGC CTGGCGCCTG TACCGCGAAC TCGGCGGCGA TGCGCAGGCC
CTGCCGGACT ATTTCGTCTC GGCCCTGGAC ATGCCCGTCC AGGCGCATAT TGCGATGATG
GAGGCGGTGC AGCCCTGGGT CGATACGGCC ATCTCCAAGA CGGTCAACAT TCCTGTCGAC
TACCCCTACG AAGACTTCAA AGACCTGTAC CTGCAAGCCT GGCGCGCGCG GCTCAAGGGC
CTGGCGACCT ACCGGCCCAA TGCCATCCTG GGCGCGGTGC TGGAGACCGA TGCGGCCCCG
GCTACGGTCC CGGCTGCGTC ACCTGCTGCA CCAGCGGCAG CGCCTGCGGT GCCCCCGGTC
GATCCGATGC GCGCCGTGAT CGAAAGCCGG CCGCAGGGCG GTCTGCCGGC AGTGGCCGAG
AAACTGGAGT ATTGGACGCA GGAAGGCCAC AAGACGCTGT ACCTGATCGT CTCGTTCCTG
CCCGTTGCCA CGGGCCAGGG CAGCGTCGAC CGGGCCATCG AGTTTTTCAT GCCGGTGGGC
CAAAGCGGCG AATCCCAGCA GTGGATCACG TCGAGCATGC GCATGCTGTC GCTGGCAGCG
CGCGGCGGCT TTCTGGAGCG CGCGCTCGGC GACATGCGCA AGGTGGCCTG GGACCGGGGC
CCGGTGCGCC TGGGCAGCCA CCGCAAGGAC GACGGCACGC TGGTGCCGAT GTGGCACGAC
TCCGAAGTGG CGGCCATGGC CTATGCGATC CAGAACATCC TGGCGCGCCG CGTGCGCGAC
CCGGTGCAGC AACGGCTGCC GCTGGACGAA CCGGCGCCCC CCCTGCCCGT GCCGCAGGCC
ATGATCGGCA AGAAATGCAA CGAATGCGGC GCCCATGCCG TGATCCGCAA GGACGGCTGC
GACTACTGCA CCCAATGCGG CCAACTCGGC GCCTGCGGGT GA
|
|---|
| Protein sequence | MQREPQPCPD LGLQPISQDV LCEKYLKPGE TTAQMLYQRV ARALASVEAP ELRSRYEALF
LANLQAGAIG AGRIMSAAGT DIQATLINCF VQPVGDCIQG QDEDGFPGIY EALREAAETM
RRGGGVGYDF SRIRPKGARV MATASMASGP CSYMNVFDQS CATVESAGAR RGAQMGVLRI
DHPDVHEFIS AKRQPGRWNN FNVSVSVPDA FIQALQDDAA WDLVHKARPG AALLAQGAHQ
RADGQWVYAS VPARALWERI MRSAYDYAEP GILFLGRINE DNNLHYCETI TATNPCGEQP
LPAYGCCDLG PVILPRFVRH PFGFGGAAAF DFEAFAQAVA LQVRALDNVL DLTYWPLPQQ
REEAMAKRRI GVGFTGLGNT LAMLCLRYDR PEGRAMAVRI ARCMRDAAYR ASVDLAREKG
AFPHFSAGPY LAEGRFASRL PEALKAAIRQ HGIRNSHLLS IAPTGTVSLA FADNASNGIE
PSFAWTYKRK KRAADGGSTE YAVQDHAWRL YRELGGDAQA LPDYFVSALD MPVQAHIAMM
EAVQPWVDTA ISKTVNIPVD YPYEDFKDLY LQAWRARLKG LATYRPNAIL GAVLETDAAP
ATVPAASPAA PAAAPAVPPV DPMRAVIESR PQGGLPAVAE KLEYWTQEGH KTLYLIVSFL
PVATGQGSVD RAIEFFMPVG QSGESQQWIT SSMRMLSLAA RGGFLERALG DMRKVAWDRG
PVRLGSHRKD DGTLVPMWHD SEVAAMAYAI QNILARRVRD PVQQRLPLDE PAPPLPVPQA
MIGKKCNECG AHAVIRKDGC DYCTQCGQLG ACG
|
|---|
| |