Gene Veis_5004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_5004 
Symbol 
ID4695071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp5553147 
End bp5554220 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content70% 
IMG OID639852739 
Productinner-membrane translocator 
Protein accessionYP_999708 
Protein GI121611901 
COG category[R] General function prediction only 
COG ID[COG4603] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAGGC TGGAGCCGCG CCCCGAAGCC TCCCGGCTCT GGAGCTATGG CTCGCCGCTG 
CTGGCGCTGG CGCTGACGGT GCTGATCGGC ACGGCCTTGT TCATCGCGCT GGGCAAGGAC
CCGGTGCGCG GGCTGCAATT GTTCTTCTGG GAGCCGCTCA AGTCGCGCTA TGCGCTCGGC
GAGTTGATGG TCAAGGCCAC GCCGCTGCTG CTGATCGCGC TCGGGCTGGC CCTGTGCTTT
CGCGCCAACG TCTGGAACAT CGGCGCCGAG GGGCAGTACG TGATCGGCGC CGTCGCCGCC
GGCGGCGTGG CGCTGCTGGC CAACCAGCGC ACGGGCGCCT GGATCTGGCC GGCCATCTTG
CTCGCCGGCG TGCTGGGCGG CATGGCCTGG GCGGCGCTGG TGGCCCTGTT GCGCGACCGG
TTCCATGCGA ACGAAATCCT GGTCAGCCTG ATGCTGGTCT ACGTGGCCGC GCTGGTGCTG
GGCTATCTGG TCTATGGCCC CTGGAAAGAC CCGCTGGGCT ACAACTTTCC GCAGACCCGG
ATGTTTGACA AAGGCACGCA GATACCGCGG CTGATGCCAG GCTCGCGCAT GACGATCGGC
CTGCTGCTGG CGCTGGCCGG GGCGGCGGCG CTGTGGGTGT ATTTGTTTCG CACCCGTGCC
GGCTTTGCGC TGCAAGTGGG CGGGCTGGCG CCGGCAGCGG CCCGCTACGC CGGCTTTTGC
CCGCGCCGGG CGCTGTGGAC GGCGCTGCTG ATCTCCGGCG GCGCGGCCGG CCTGGCGGGC
GCGCTGGAGG TGGCCGGCCC GATTGGCCAG CTCACGCCGC ATGTGCCGGC GGGCTACGGC
TTTGCCGCGA TCATCGTGGC CTTCGTCGGG CGCCTGCACC CGGCGGGCAT GATGGTCTCG
GCGCTGCTGA TGAGCATGTT CTACATCGGC GGCGAGCTGG CGCAATCGCG CCTGGGGCTG
CCCAAATCGC TCACCGGCGT GTTCCAGGGG CTGCTGCTGT TCACGCTGCT GGCCTGCGAC
ACGCTGATCG CATACCGCGT GCGCCGGGGC GCAGGCGCCA AAGGCGGTGC CTGA
 
Protein sequence
MFRLEPRPEA SRLWSYGSPL LALALTVLIG TALFIALGKD PVRGLQLFFW EPLKSRYALG 
ELMVKATPLL LIALGLALCF RANVWNIGAE GQYVIGAVAA GGVALLANQR TGAWIWPAIL
LAGVLGGMAW AALVALLRDR FHANEILVSL MLVYVAALVL GYLVYGPWKD PLGYNFPQTR
MFDKGTQIPR LMPGSRMTIG LLLALAGAAA LWVYLFRTRA GFALQVGGLA PAAARYAGFC
PRRALWTALL ISGGAAGLAG ALEVAGPIGQ LTPHVPAGYG FAAIIVAFVG RLHPAGMMVS
ALLMSMFYIG GELAQSRLGL PKSLTGVFQG LLLFTLLACD TLIAYRVRRG AGAKGGA