Gene Veis_4979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4979 
Symbol 
ID4694425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp5509339 
End bp5510163 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content66% 
IMG OID639852714 
ProductABC-2 type transporter 
Protein accessionYP_999683 
Protein GI121611876 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCACC CCGTCACGCA TCGGATGCGC GCGCTGCGGG CGGTGGCGGG CCGGGAGATA 
GGCAAGTTCT TCCAGCAGCC TGGCCGGATG CTCTCGTCGC TGGTGCGGCC CCTGCTGTGG
TTTTTGGTGT TTGCCGCCGG TTTCCAGAAC ATCTTCGGGG TGGCCATCAT CGCGCCTTAC
CAGACCTATA TCGAATACAA GGTCTACATG GCGCCGGGGC TGCTCGCGAT GATCGCGCTG
TTCAACGGCA TGCAGTCCTC GCTGGCGATG GTGTACGACC GCGAGATGGG TGTGATGCTG
CTGCTGCTGA CAGCCCCCCT GCCGCGCGGC TGGCTGCTGG CCTGCAAACT GCTCGGCGGC
ATGTTGCTGT CCTTGCTGCA AATGCTGGCC TTCCTGCTGG TGGCGTTAGG CTTTGGCGTG
ACGTTCGCAT GGCAAGACCT GCCGGGCGCG CTGGCGGTGA TGGCGCTGGC GGCGCTGATG
CTGGGCGCGC TCGGCCTGCT GCTATCGGTG CATGTGCGGC AGTTGGAGAA CTTTGCCGGC
ACGATGAATT TCGTGATCTT CCCGATGTTC TTCATCAGCT CGGCCCTCTA CCCGCTGTGG
AAGCTGGAGG AATCGGGCGC CACCATCGTC TACCAACTGG CGCGCGCCAA CCCGTTCACG
CACGCGGTCG AAGCCATCCG CTTCGCGCTG TACGGCCAGG CGCAATGGAG CAGCCTGGCG
GTGGTGGCAG GCTGTGCGGC GCTGTTCTTC ACACTCGCAC TGCGGGGCTA CGACCCGCAG
CGCGGCGTGG CCCGGGCAGC GCGCGACCTG CGCGCCGGCC GTTGA
 
Protein sequence
MAHPVTHRMR ALRAVAGREI GKFFQQPGRM LSSLVRPLLW FLVFAAGFQN IFGVAIIAPY 
QTYIEYKVYM APGLLAMIAL FNGMQSSLAM VYDREMGVML LLLTAPLPRG WLLACKLLGG
MLLSLLQMLA FLLVALGFGV TFAWQDLPGA LAVMALAALM LGALGLLLSV HVRQLENFAG
TMNFVIFPMF FISSALYPLW KLEESGATIV YQLARANPFT HAVEAIRFAL YGQAQWSSLA
VVAGCAALFF TLALRGYDPQ RGVARAARDL RAGR