Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4972 |
Symbol | |
ID | 4692948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 5502373 |
End bp | 5504199 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639852708 |
Product | Pyrrolo-quinoline quinone |
Protein accession | YP_999677 |
Protein GI | 121611870 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4993] Glucose dehydrogenase |
TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.779778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCC GAACCATGAT GGTGGGGCTG GCAATGCTGG CCACAGCCAC CGCGTCGATC ACCGCACGCG CAGACGCCGA GCTCGACAAG CTGATCGCCA ACCCGGCCAA CTGGGCCGCG CAGGCGGGCG ATTACGCCAA TCACCGCTAC AGTGAACTCA AGCAGGTCCA TGCCGGCAAC GCGAAGAACC TGCAGGTCGC GTGGACGGTG TCCACCGGCG TGCTGCGCGG CCATGAAGGC TCGCCGCTGG TGTTCGGCGA CACGATGTAC ATCCACTCGC CGTTTCCGAA CAAGGTGATC GCGCTGAACC TGAAGGACCA GACCTTCAAA TGGAAGTACG AGCCCAAGCA GGACAACAAC GTGGTGCCGG TGATGTGCTG CGATACCGTC AGCCGCGGCC TGGCCTATGG CGACGGCAAG ATACTGCTGC AGCAGGCCGA CACCACCTTG GTGGCGCTCG ATGCCCACAC CGGCAAGGTC GTGTGGAGCG TCAAAAATGG CGACCCCAAG ATCGGCGAGA CCAATACCAA CGCTCCGCAT GTCTTCAAGG ACAAGGTCAT CACCGGTATC TCCGGCGGCG AGTTCGGCGT GCGCGGCCGC CTGATCGCCT ATGACCTGAA AACCGGCAAG ACAGTCTGGA CTGCTTTCAG CACCGGCCCG GACGAGGACA TGCTGTTCGA TCCCGCCACC ACGATGACCT GGACCGACGG CAAGATGGCG CCGGTCGGCA AGGACTCCTC GCTCAAAACC TGGAAGGGCG ACCAGTGGAA GCTCGGCGGC GGCACCACCT GGGGCTGGTA TTCCTACGAT CCCAAGCTGA ACCTGGTCTA CTACGGCAGC GGCAACCCGG GCACCTGGAA CCCGTCGCAG CGCCCGGGCG ACAACAAGTG GTCGATGACG CTGTTCGCAC GCGACCTCGA CACCGGCAAA GCCAGGTGGG TGTACCAGAT GACGCCGCAC GACGAGTGGG ACTATGACGG CGTCAACGAG CTCGTGCTGG CCGACCTGAA CATCAAGGGC AAGAAGGTGC CGTCCGTGGT GCACATGGAC CGCAACGGTT ACGCCTACAC GCTCCAGCGC GAAACCGGTG AACTACTGGT GGCCGAGAAG TTCGACCCGA CCATCAACTG GGCATCGAAG ATCGACATGA AGAGCGGGCG CCCGGTCGTC AACGCCAAAT ATTCGCCCGC CACCACGGGG CCGGATGTCA ACGTCAAGGG CATCTGCCCG TCGGCGCTCG GGACCAAGGA CCAGCAGCCG ATGAGCTACG ACCGCAAGTC GGGCATCTTC CTGGTGCCGA CCAACCATGT CTGCATGGAC TACGAGCCCT TCCAGGTCGA ATACACCGCA GGCCAGCCCT ATGTGGGCGC CACCTTGGCG ATGTACCCGA CGCCGAAAAG CCACGGCGGC ATGGGCAACT TCATTGCCTG GGATGCGGCC GCCGGCAAAA TCCTGTGGTC CAAGCCGGAG CGCTTTTCGG TCTGGTCCGG CGCGCTGGCA ACGGCCGGCG ACATCGTGTT CTACGGCACG CTGGAAGGCT ACCTGAAGGC CGTCAGCATC AAGGACGGCA AGGAGCTTTG GAAGTTCAAG ACCCCCTCCG GCATCATTGG CAACGTCTTC ACCTATCTGT TCGAAGGCAA GCAGTATGTC GGCGTCTACT CGGGCATCGG CGGCTGGGCC GGCATCGGCA TGGCGGCCGG GCTGGAGAAT TCCTCCGATG GCCTGGGCGC AGTCGGCGGC TACAGGGACC TGGCCAAGTA CACCGATCTC GGCGGCACCT TGTTCATCTT TGCGTTGCCG AGCAACAGCC AAGCAACCGG TTCCTGA
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Protein sequence | MKFRTMMVGL AMLATATASI TARADAELDK LIANPANWAA QAGDYANHRY SELKQVHAGN AKNLQVAWTV STGVLRGHEG SPLVFGDTMY IHSPFPNKVI ALNLKDQTFK WKYEPKQDNN VVPVMCCDTV SRGLAYGDGK ILLQQADTTL VALDAHTGKV VWSVKNGDPK IGETNTNAPH VFKDKVITGI SGGEFGVRGR LIAYDLKTGK TVWTAFSTGP DEDMLFDPAT TMTWTDGKMA PVGKDSSLKT WKGDQWKLGG GTTWGWYSYD PKLNLVYYGS GNPGTWNPSQ RPGDNKWSMT LFARDLDTGK ARWVYQMTPH DEWDYDGVNE LVLADLNIKG KKVPSVVHMD RNGYAYTLQR ETGELLVAEK FDPTINWASK IDMKSGRPVV NAKYSPATTG PDVNVKGICP SALGTKDQQP MSYDRKSGIF LVPTNHVCMD YEPFQVEYTA GQPYVGATLA MYPTPKSHGG MGNFIAWDAA AGKILWSKPE RFSVWSGALA TAGDIVFYGT LEGYLKAVSI KDGKELWKFK TPSGIIGNVF TYLFEGKQYV GVYSGIGGWA GIGMAAGLEN SSDGLGAVGG YRDLAKYTDL GGTLFIFALP SNSQATGS
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