Gene Veis_4965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4965 
Symbol 
ID4692645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp5495005 
End bp5495934 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content69% 
IMG OID639852701 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_999670 
Protein GI121611863 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.031791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCCA ACATGCAGAT CCACCAGGCC GTCCAGGCAC CCGGTCTCGC GCCCGCCGCC 
CGCCCGGCAC CCGTGCGCCA TGGCAAGTTC CAGTGGTTCG TGCGCAAGCT GTTCCGCGAA
AAGCGCCTGG GCGCGGCCGG TTTCATGATC ACCGCTGTGT TCCTGTGCTG CGGCCTGTTT
GCCGACGCGC TGGCGCCCTA CGGGATGAAC GAGGTCGACA TGGGCGCGCG GCTGCAGGCG
CCGTCCTGGG CGCACCCGTT CGGCACCGAC AACCTGGGCC GCGACCTGCT GTCGCGCTGC
ATCTACGGCG CGCAGATCTC GGTGGTCATC GGGCTCATGG TGGCGGCGAT CTCGACCTGC
CTCTCGGCCC TGATCGGCAT CGTCTCGGGC TATTTCGGCG GCAAGGTCGA CATGCTGGTG
CAGCGCTTCG TCGATGCGTG GATGAGCTTC CCGGGCCTGA TCGTGCTGAT CGTCGTGGCC
TCGGTGTTCG GCTCGGGCAT CACGCAGATC ATCATCACGC TGGGGCTGCT GATCGGCATC
GGCGGCTCGC GCATCGTGCG CGGTGCGGTC GTTTCGGTGC GCGAGGACAT GTACATCCAC
GCCGCCAAGT CCATCGGCGC GTCGCCCTTG CGCATCCTGT GGCGCCATGT GCTGCCCAAC
GTGCTCGCGC CCTTGATCGT GCTGTTCACG TCCAGCGTGG GCACGGCCAT CCTGGCCGAG
TCCGGCCTGT CCTTCCTGGG CCTGGGCGTG CCGCCGCCGC ACCCGACCTG GGGCGGCATG
CTGTCCGGCA ACGGCCGCAC GTACATGCTG CAAGGCCCCT GGCTGGCGCT GGCGCCCGGC
CTGTGCCTGA CGCTGGCCGT GTATGCCATC AACGTGTTCG GCGATGCGCT GCGCGACATG
CTCGACCCGC GGATGCGGGG CGCGCGTTGA
 
Protein sequence
MAANMQIHQA VQAPGLAPAA RPAPVRHGKF QWFVRKLFRE KRLGAAGFMI TAVFLCCGLF 
ADALAPYGMN EVDMGARLQA PSWAHPFGTD NLGRDLLSRC IYGAQISVVI GLMVAAISTC
LSALIGIVSG YFGGKVDMLV QRFVDAWMSF PGLIVLIVVA SVFGSGITQI IITLGLLIGI
GGSRIVRGAV VSVREDMYIH AAKSIGASPL RILWRHVLPN VLAPLIVLFT SSVGTAILAE
SGLSFLGLGV PPPHPTWGGM LSGNGRTYML QGPWLALAPG LCLTLAVYAI NVFGDALRDM
LDPRMRGAR