| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4964 |
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| Symbol | |
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| ID | 4691902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 5493245 |
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| End bp | 5494960 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639852700 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_999669 |
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| Protein GI | 121611862 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000193242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGA ACAGGAACTT GCTCGCCCGT CTGGCCCCGC TGGCTGCCGG CATTGCCATG
GCGGCTGCAG CCGGCACCGC GCAGGCCCAG GCCCACGCCG AGACGCCCAA GTACGGCGGC
TCGCTGGATG TGGCCACCAC GAGCACGGGC GTCGCGACCC TGTCCTGGGA CCTGGCCGAC
TGGCAGGCCA CACTGCAGAC GCGTGACACG GGCCAGTTCT ACGAGCAGCT GTTCTCGGTC
GATCTCTCGA AGGCCAAGAG CCGTGGCGGC AAGTACCCGT TCACGATCAG CGGCTGGCAG
CCCACCGACG CCGTGCGCGG CGAACTGGCC GAAAGCTGGA ATTGGGTCAC GCCGCTGGTG
CTGGAGGTCA AACTGCGCCA GGGCGTGAAG TTTCCGGCCA AGCAGGGCGT GATGGCCGAG
CGGGAGTTCG TGGCCGACGA CGTGGTCTAC AGCTTCAACC GGCTCAACAA CAGCCCGAAG
AAGACCCAAG GCTACTACGA CCACCTGGAC AAGGTCGAGG CCAAGGACAG GCACACGCTC
GTCTTCACGT TCAAGCAGTT CCTGGCCGAC TGGGACTACC GCTTCGGCAA CGGCTTCTTC
TCCGGCATCA TGCCCAGGGA GGTCACCGAG GCCGGCGGCG GCAACTGGAA GAACGCCAAC
GGCACGGGCC CCTTCATGCT CACGAACGTG GCGCAGGGTA ATTCGCTGAC CTTCACCAGG
AACCCGATCT ACTGGGATCA GGAAGTCATC GGCGGCAAGC CCTACAAACT GCCCTTCGTC
GACAAGCTCA CGCACCGCGT GATCAAGGAC GAGGCCACGC AGCAGGCCGC GCTGCGCACC
GGCAAGCTCG ACATCCTGTC CTCGATCTCC TGGGAGGCCG CGCGCGAGCT GAAAAAGAGC
ACGCCGCAGT TGCAGTGGAA CCGCTGGCTG TCCATGGCCG CCGCGCGCGT GGCGCTGCGC
GTGGACACCA AGCCCTTCAC CGACGTGCGC GTGCGCCGCG CGCTGAACAT GGCGGTCAAC
AAGCAGGAAA TCATCGACAA GTTCTACGGC GGCGAAGGCG AGATGTTCGT GTTCCCGATG
AACCCGGCAT ACGTGGGCTA CCACACGCCG CTGAAGGACA TGCCGGCCTC GGTGCAGGAA
CTGTTCAAGT ACGACCCGGC CAAGGCCAGG AAACTGCTGG CCGAGGCCGG CTACCCCAAG
GGCTTCGCGT TCAAGATGCA GATCTGCACC TGCACCACCG AGCAGATGGA GCTGATGCCG
CTGGTCGCGG CCTACCTGGA GATGGTGGGC GTGAGGATGG AGATCGTGCC CATGGAATAC
GGCGCGCACC TGTCGGCCAT GACCAGCCAC GTCAACGGCG CGGGCTACCT CACGACCGTT
TCCGACGTGA ACCCCACGAC CTCGCTGCGC ATCAACTTCG GCAAGGGCCA GGTCTACAAC
GCGCCGATGT GGAACGACGC CAGGTTCGAC GCGCGTGTGG CCGATGCGCT GGCCGAGCGC
GACGAGCCCA GGCGCCAGCA GATCCTGCGC GAGCTGACCG CGCAGATCGT CGAGCAGGCG
CCCGCCATCT GGATGCCGGC CCCGTACCGC TACACGGCCT GGTGGCCCTG GGTCAAGAAC
TACGGCGGCG AGCTGTTCGT CGGCGCCGGC CGCAGCGCGC CCATCCATGC GCGTGTCTGG
ATCGACCAGG ACCTGAAGAA GACGCTCGGC TTCTGA
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| Protein sequence | MKTNRNLLAR LAPLAAGIAM AAAAGTAQAQ AHAETPKYGG SLDVATTSTG VATLSWDLAD
WQATLQTRDT GQFYEQLFSV DLSKAKSRGG KYPFTISGWQ PTDAVRGELA ESWNWVTPLV
LEVKLRQGVK FPAKQGVMAE REFVADDVVY SFNRLNNSPK KTQGYYDHLD KVEAKDRHTL
VFTFKQFLAD WDYRFGNGFF SGIMPREVTE AGGGNWKNAN GTGPFMLTNV AQGNSLTFTR
NPIYWDQEVI GGKPYKLPFV DKLTHRVIKD EATQQAALRT GKLDILSSIS WEAARELKKS
TPQLQWNRWL SMAAARVALR VDTKPFTDVR VRRALNMAVN KQEIIDKFYG GEGEMFVFPM
NPAYVGYHTP LKDMPASVQE LFKYDPAKAR KLLAEAGYPK GFAFKMQICT CTTEQMELMP
LVAAYLEMVG VRMEIVPMEY GAHLSAMTSH VNGAGYLTTV SDVNPTTSLR INFGKGQVYN
APMWNDARFD ARVADALAER DEPRRQQILR ELTAQIVEQA PAIWMPAPYR YTAWWPWVKN
YGGELFVGAG RSAPIHARVW IDQDLKKTLG F
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