| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4952 |
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| Symbol | |
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| ID | 4691666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 5476271 |
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| End bp | 5478271 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639852688 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_999657 |
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| Protein GI | 121611850 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.656553 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCCT CTCGGGAGCA TCTCGATGTC GTGATGAACG TCGTGGGCAA CGAGGCTGCC
TTGACCGCGC TGGCCCTCGA CAACCCCATC CACCGCTCGT GGCTGCGCTG CTACAACGAC
TACGGGCTGG ATCCCGCCGG GCGCCAGCAC ATGCGCGTGG AAAGCTCGGG TGCGCTGCGC
GACCGGCACG CCAAGCACCT GGCCTACCTG CACACCGCGC GCGCCGCGAT GGAGGAGCTC
TACGCGCGCG TGGCCGACCT GGGTTATGTG CTGCTGCTGG CCGATGCAGA CGGCATCACG
CTGGACTACC TGGGCCACCG GGCCGGCGAT TCGCCGATCC GCGCCGGCCT GGTGGTCGGC
GCCAACTGGC ACGAGGCGCA CGCCGGCACC AACGGCATCG GCACCTGCCT GGCGGAATGC
CGCACGCTGA CCTGCCACTA TGACGACCAT TTCTATGCCG GCAACCTCGA CCTCAGTTGC
ACGGCCACGC CGCTGTTCGA TCCTGAGGGC GAGCTTATGG GCGCGCTGGA TCTGTCCTCG
CTCACAACAC CCGATTCACG CGCGAGCCAG CATCTGATCG GCCACATGGC CTCGATGTAT
GGCCGCATGA TCGAGGATGC CAATTTCCTG CGGCACTTCG GCCACCGGTG GGTCCTGCGG
CTGGGACGCG CCGCGTCGCT CGTCGAGGTC AATGCCGAGG CCTTGCTGGC CTTCGATGCC
GACGGCGTGA TCGTCGGTGC CGACAGCGGC GCGCGCCGGC TGCTGCAGAC CGTGGACGGG
CAGAGCGTGG GGGCGCTGCT CGGCCAGCCG CTGTCGGCCG TGTTCCGCAA CCCGCTGGGC
GATGTCATGC GGCTGGCGCG CGCCGGCAAC GGCGACAGCA GTGCACTGCT GCACCCCTGG
CTGGGCGAGC CGCGCCAGGC CATGGTGCGT GGGCCGCAGC GCAGGACGCG CATGTCGGGT
GCCACCTCCG TCCAGGCTGA TCACCTGCAG GCTGCGCCGC AGGGCGATGT GTCTGCGCTG
GAGGCTCTGT CCGACCGCGA CCCGAAGATG GACGCGCTCA TCTCCCAAGC CCGCCGCCTG
GCCGGCAGGT CGATCAACAT GATCATCCAG GGCGAGACCG GCACCGGCAA GGAGGTGCTT
GCCCAGGCGA TCCACCAGGC CAGCTCGCGC GCAGACCGGG CCTTCGTGGC CATCAACTGC
GCGGCCATCC CCGAATCGTT GATCGAAAGC GAACTGTTCG GCTACCTGCC GGGTACTTTT
ACCGGTGCGC GCAGCCGCGG CATGGTGGGC CTGATCCAGC GGGCGGACGG CGGCACCTTG
TTCCTTGACG AGATCGGCGA CATGCCGCTG GCACTGCAGA CGCGGTTGCT GCGAGTGCTG
GCCGAACGCG AGCTGCTGCC CCTGGGTGCC GACAAACCCA TCCCCTTGGC CTTGACCGTA
CTGGCAGCTT CGCACCGCAA CCTACGCGAG CGCATTTCAG CCGGGCAGTT CCGCGAAGAC
CTCTACTACC GTCTCAGCGG CGCCACGCTG AGCCTGCCGC CGCTACGGGA GCGGCAGGAC
CGCGCGTACC TGGTCCGCCG CATCCTTGGC GAAGAGGCCA CCGCCATCGA CGCCAACGGC
CACCTCACCG TGCAAGCGAT GGAACTGCTG CTGCGTTATC CCTGGCCTGG CAACATCCGC
GAGTTGCGCA ACGTGCTGCG CTACGCCCTT TCGATGGCTG AAGGCCATGG CATCGGCGCC
CGCGACCTGC CACTGGAGGT GCAACTGGTC GATGCGCCGG CCCCAGTCTT GCTGGCGACT
GTGCCCGCAC CGCCCGCCAT CGACGTAGCC CCCGGTGGGG AGGACGCCGA TGCCAGCCCC
GAGGTGCACC AACTGCTGGG CGCCCTGCGG CGCCATCATT GGGTGATCGC CGATGTGGCG
CGCGAGCTGT CCACGTGCCG CGCCACGGTG TACAGGCGCA TGAAGCGACA CGGCATCGTC
GCGCCCACGC AGTTCTGTTG A
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| Protein sequence | MTPSREHLDV VMNVVGNEAA LTALALDNPI HRSWLRCYND YGLDPAGRQH MRVESSGALR
DRHAKHLAYL HTARAAMEEL YARVADLGYV LLLADADGIT LDYLGHRAGD SPIRAGLVVG
ANWHEAHAGT NGIGTCLAEC RTLTCHYDDH FYAGNLDLSC TATPLFDPEG ELMGALDLSS
LTTPDSRASQ HLIGHMASMY GRMIEDANFL RHFGHRWVLR LGRAASLVEV NAEALLAFDA
DGVIVGADSG ARRLLQTVDG QSVGALLGQP LSAVFRNPLG DVMRLARAGN GDSSALLHPW
LGEPRQAMVR GPQRRTRMSG ATSVQADHLQ AAPQGDVSAL EALSDRDPKM DALISQARRL
AGRSINMIIQ GETGTGKEVL AQAIHQASSR ADRAFVAINC AAIPESLIES ELFGYLPGTF
TGARSRGMVG LIQRADGGTL FLDEIGDMPL ALQTRLLRVL AERELLPLGA DKPIPLALTV
LAASHRNLRE RISAGQFRED LYYRLSGATL SLPPLRERQD RAYLVRRILG EEATAIDANG
HLTVQAMELL LRYPWPGNIR ELRNVLRYAL SMAEGHGIGA RDLPLEVQLV DAPAPVLLAT
VPAPPAIDVA PGGEDADASP EVHQLLGALR RHHWVIADVA RELSTCRATV YRRMKRHGIV
APTQFC
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