| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4940 |
|---|
| Symbol | |
|---|
| ID | 4692378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 5459857 |
|---|
| End bp | 5461125 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639852675 |
|---|
| Product | aspartate kinase |
|---|
| Protein accession | YP_999645 |
|---|
| Protein GI | 121611838 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0527] Aspartokinases |
|---|
| TIGRFAM ID | [TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.43762 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.491222 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTGA TCGTTCACAA ATACGGCGGC ACCTCGATGG GCTCACCCGA GCGCATCCGC
TGCGTTGCCA AGCGCGTCGC CAAATGGGCC CGCGCAGGCC ACCAGATGGT GGTGGTGCCC
AGCGCCATGA GCGGCGAAAC CAACCGCCTG CTCGCGCTGG CCAAGGAACT CGCCCCCGCC
CGCGCCACCG ATGCCTACCA CCGCGAACTC GACATGCTGG CCGCCACCGG CGAGCAGGCT
TCATCGGCAT TGCTGGCCAT TGCGCTGCAG GCCGAGGGCC TGGGCTCGGT CAGCTACGCC
GGCTGGCAGT TGCCGATCCG CACCGACAGC AGCTACACCA AGGCCCGCAT CGAATCCATC
GACGACCAGC GTGTGCGTGC CGATCTGGCC CATGGCAAGG TGGTCATCGT GACCGGCTTT
CAAGGCATCG ACGACGAAGG CAACATCACC ACGCTCGGCC GTGGCGGCTC GGACACCTCG
GCCGTGGCCG TGGCGGCGGC GATGAAAGCC CACGAATGCC TGATCTACAC CGACGTCGAC
GGCGTATACA CCACCGACCC GCGCGTGGTG CCCCAGGCCC GGCGCCTGCA GACGGTGAGC
TTCGAGGAAA TGCTTGAAAT GGCCAGCCTG GGCAGCAAGG TGCTGCAAAT CCGCTCGGTC
GAATTCGCCG GCAAGTACAG GGTCCGGCTG CGCGTGCTGT CGAGCTTCAC CCCCTGGGAC
ATGGACATTG ACGAAGAAGC CCGCTCCGGC ACGCTGATCA CTTTCGAGGA GGACGAAAAA
ATGGAACAAG CCGTCGTATC CGGCATCGCT TTCAACCGCG ACGAAGCCAA GCTCTCCGTG
CTCGGCGTGC CCGACAAGCC CGGCATCGCC TACCTGATCC TGGGCGCCGT GGCCGATGCC
AACATCGATG TCGACATGAT CATCCAGAAC CTGAGCAAGG ATGGCAAAAC CGACTTCAGC
TTCACCGTGC ACCGCAACGA CTACGCCCGC GCCATCGATC TGATCAAGGA AAAAGTGCTC
CCCGTGCTGG GCGCGCACGA AGTGGTTGGC GACACCAACA TCTGCAAAGT CAGCATCGTC
GGCATCGGCA TGCGCAGCCA TGTGGGCGTG GCCAGCAAGA TGTTTCGCGT GCTCAGCGAA
GAAAGCATCA ACATCCAGAT GATCTCCACA TCCGAAATCA AGACCTCGGT CGTGATCGAC
GAAAAATACA TGGAGCTGGC CGTGCGCAGC CTGCACCAAG CCTTCGGGCT GGACCAGGAA
GCGGCCTGA
|
|---|
| Protein sequence | MALIVHKYGG TSMGSPERIR CVAKRVAKWA RAGHQMVVVP SAMSGETNRL LALAKELAPA
RATDAYHREL DMLAATGEQA SSALLAIALQ AEGLGSVSYA GWQLPIRTDS SYTKARIESI
DDQRVRADLA HGKVVIVTGF QGIDDEGNIT TLGRGGSDTS AVAVAAAMKA HECLIYTDVD
GVYTTDPRVV PQARRLQTVS FEEMLEMASL GSKVLQIRSV EFAGKYRVRL RVLSSFTPWD
MDIDEEARSG TLITFEEDEK MEQAVVSGIA FNRDEAKLSV LGVPDKPGIA YLILGAVADA
NIDVDMIIQN LSKDGKTDFS FTVHRNDYAR AIDLIKEKVL PVLGAHEVVG DTNICKVSIV
GIGMRSHVGV ASKMFRVLSE ESINIQMIST SEIKTSVVID EKYMELAVRS LHQAFGLDQE
AA
|
|---|
| |