| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4914 |
|---|
| Symbol | |
|---|
| ID | 4693749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 5433957 |
|---|
| End bp | 5435084 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639852650 |
|---|
| Product | extracellular ligand-binding receptor |
|---|
| Protein accession | YP_999620 |
|---|
| Protein GI | 121611813 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.113346 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.710388 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATTGA AACTGAAACA TCTGATGCTG GCCGCTGCGA CGACCGTGGT TGGCACGGCC
CTGGCACAAG AGCAGGTGGT CAAGATTGGC CATGTGGCTC CGATCTCCGG CCCCCAAGCC
CATTCCGGCA AGGACAACGA AAACGGCGCC CGCATGGCCA TCGAAGAACT CAACACCCAG
GGCATCAGCA TCGGGGGCAA GAAAATCAAG TTCGAGTTGC AGGCCGAAGA TGACGCGGCC
GACCCCAAGC AAGGCGCAGC CGTGGCACAA AAACTGTGCG ACTCCCATGT TGCTGGCGTT
ATCGGTCACC TGAACTCCGG CACCACCATT CCGGCGTCCA AGATCTACAA CGATTGCGGC
ATTCCGATGG TGACAGGCGC TGCGACCAAC CCCAACCTGA CCAAGCCGGG CTACAAAACC
ACCTTTCGCA TCATCGCCAA CGACAACACC CTGGGTGCGG GTCTGGCGTC CTACGCGGTG
GACCATCTCA AGCTCAAGAC CGTCGCTGTC ATCGACGACC GCACCGCTTA CGGCCAAGGT
GTGGCCGAGG TGTTCAAAAA GACCGCCATC GCCAAGGGCA TGCAGGTGGT CGACGAGCAG
TTCACGACCG ACAAGGCCAC CGACTTCATG GCCATACTGA CCGCCATCAA GGCGAAAAAT
CCCGACGCCG TGTTCTACGG CGGCATGGAC CCCCAGGCCG GCCCGATGCT GCGCCAAATG
GAACAGTTGG GCATGGTCCG CATGAAGTTT TTCGGTGGCG ACGGCGCTTG CACGAACGAA
ATCGCCAAGC TGTCGGGCGG TGCCAAGACC CTGGACAACG TGATCTGCGC CGAAGGCGGT
GCTTCGCTGG ACAAGATGCC TGGCGGCCTG GCCTGGAAGG CCAGGTACGA CGCCAAGTAC
CCTGGACAGT TTCAGGTGTA CAGCCCCTAC ATCTATGACG CCACGATGTT GCTGGTCGAC
GCGATGAAGC GCGCCAACTC CGTCGACCCC AAGGTCTACC TGAATGAGTT GGCCAAGTCC
AACTTCAGGG GCGTGACGAC GACGATCGTT TTCGAGCCCA ATGGCGAAAT GAAGGACCCT
CCCTTCACGC TGTACTCGTT CAAGGACGGC AAGAAAACCC CGCTGTGA
|
|---|
| Protein sequence | MQLKLKHLML AAATTVVGTA LAQEQVVKIG HVAPISGPQA HSGKDNENGA RMAIEELNTQ
GISIGGKKIK FELQAEDDAA DPKQGAAVAQ KLCDSHVAGV IGHLNSGTTI PASKIYNDCG
IPMVTGAATN PNLTKPGYKT TFRIIANDNT LGAGLASYAV DHLKLKTVAV IDDRTAYGQG
VAEVFKKTAI AKGMQVVDEQ FTTDKATDFM AILTAIKAKN PDAVFYGGMD PQAGPMLRQM
EQLGMVRMKF FGGDGACTNE IAKLSGGAKT LDNVICAEGG ASLDKMPGGL AWKARYDAKY
PGQFQVYSPY IYDATMLLVD AMKRANSVDP KVYLNELAKS NFRGVTTTIV FEPNGEMKDP
PFTLYSFKDG KKTPL
|
|---|
| |