| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4910 |
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| Symbol | |
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| ID | 4692180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 5427786 |
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| End bp | 5428979 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639852646 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_999616 |
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| Protein GI | 121611809 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.618157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.278899 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAACC CCTTCAACCG CCGCCAGATC GTCAAGACCG GCGGCTCGAT GATCGTGCTG
GGCGCCGCAG GCGGTGTCGC CAGGCTGGCC GCCGCGCAGG ACGGTGCCAC CGTCAAGCTC
GGGCTGCTGC ATTCGCTGTC GGGCACCATC GCCATCGCCG AGGCTGCGCT GGTCGATGCC
GAGAAACTGG CCATCGAACA GATCAACGCC GCCGGCGGCG TGCTGGGCAA GAAGATCGAG
GCCGTGGTGG AAGACGGCGC CAGCGAGAAC CCGGTGTTCG CCGAAAAGGC GCGCAAGCTG
CTCGAGCGCG ACAAGGTCGC GGCCATCATC GGCTGCTACA CCTCGGCCTC GCGCAAGGCG
CTGCTGCCGG TGCTGAGCCA GGCCAAGGGC TTGTTGTTCT ACCCGACCTA CTACGAGGGC
CAGGAGCAGG ACAAGCGCGT GTTCTACCCC TCGCAGGAGG CCACGCAGTC GGTGATCGCG
GCGGTCCAAT GGATGGCGCG CGAGAAGGGC AAGAGCTTCT TCCTCGTCGG CTCCGACTAC
ATCTATCCGC GCACCTGCAA CAAAATTGCC AAGCCGGCCA TCACCAAGGC CGGCGGCAAG
GTGGTGGGTG AGGAATATGC GCCGCTGGGC CACACCGAGT TCTCGTCGAT CATCAACAAG
ATCAAGGCCG CCAGGCCCGA CTGCATCTAC AGCACGGTGG TGGGCGGCTC CAACGTGGCC
TTCTACAAGC AACTGCGCGC AGCGGGACTC GATGGCGCCA GGCAGGTGCT GCTGTCGACC
GTGGTGTCGG AAAACGAGAT CGAAGGCATC GGCAAAGACA ACGCCGCCGG CTACTACGCC
TGCATGGGCT ACTTTCAGAG CATCGAGTCG CCGGCCAACG AGAAGTTTGT GCAAGCCTTC
AAGGCCAAGT ATGGGTCGGA GCGCGTGATC GGCGACCCGA TGGAGGTGGC CTACAACTGC
GTGTATCTGT GGAAACTGGC GGCCGAGAAG GCCAAGTCGT TCGATGTCGA CAAGGTCACG
GCCGCCGCGG CCGGCGTGGA GATCGAAGCG CCCGAAGGCA CGGTGCGCGT GCACGCCAGC
AACCACCATG TATGGAAGAA GGTGCGCGTG GGCCGTGCGC GGCCCGATGG CCAGTTCGAC
ATCGTGTGGG AATCGTCCGG ACTGATCGAG CCCAACCCCT TCCCCAAGGT CTGA
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| Protein sequence | MTNPFNRRQI VKTGGSMIVL GAAGGVARLA AAQDGATVKL GLLHSLSGTI AIAEAALVDA
EKLAIEQINA AGGVLGKKIE AVVEDGASEN PVFAEKARKL LERDKVAAII GCYTSASRKA
LLPVLSQAKG LLFYPTYYEG QEQDKRVFYP SQEATQSVIA AVQWMAREKG KSFFLVGSDY
IYPRTCNKIA KPAITKAGGK VVGEEYAPLG HTEFSSIINK IKAARPDCIY STVVGGSNVA
FYKQLRAAGL DGARQVLLST VVSENEIEGI GKDNAAGYYA CMGYFQSIES PANEKFVQAF
KAKYGSERVI GDPMEVAYNC VYLWKLAAEK AKSFDVDKVT AAAAGVEIEA PEGTVRVHAS
NHHVWKKVRV GRARPDGQFD IVWESSGLIE PNPFPKV
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