| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4909 |
|---|
| Symbol | |
|---|
| ID | 4693975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 5426847 |
|---|
| End bp | 5427749 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639852645 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_999615 |
|---|
| Protein GI | 121611808 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.26779 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTCG ACATTGCGGT GATGCAGATG TTCAACGGCG TGAGCCTGTT CACCATCTTG
CTGCTGATGG CCATCGGGCT GGCCATCGTG TTCGGCCTGA TGGGCGTCAT CAACATGGCG
CACGGCGAGC TGATGGCGCT GGGCGCGTAC ATGACCTACC TGGCGGCGCG TTTCTTCGGG
CACTTCGCGC CGGGCTGGAT GGATCTGTAC CTGTTCGCCG CGATCCCGTT CGCGTTTGCC
GTGACCTTCG CGTTCGGCTA TCTGCTCGAG CGCGGCTTCA TCCGCTTTTT CTACGACCGG
CCGCTGGACA CGCTGCTGGC CACCTGGGGC CTGAGCCTGA TGTTGCAGCA GTCCTACCGC
TCCATCTTCG GCGCGCAGGA GGTGAGCGTG CCGCTGGCCT CGTGGCTCGC GGGGGCGTGG
GAGCCGACGG CGGGCATACA GTTGCCGCTG ACGCGCATCT TCATCGCCGG GCTGACGGCC
GTCGTCGCCA TCGGCGTGTA CCTGCTGCTA TACCGCACGC CGTGGGGGCT GAAGGTGCGC
GCGGTGACGC AAAATCGCGC CATCGCCGGC GCGGTGGGCA TCGACACCCG CCGCGTCGAT
GCGATGACCT TCGCGCTCGG TTGCGGCCTG GCGGGCATCG CGGGCGCGGT GTTCACGATG
ATCGGCTCGA CCAACCCCGG CACCGGCCAG CTCTACATCG TCGACGCGTT CATCGTGGTG
GTGTTCGGCG GCGTGCAAAG CCTGATCGGC ACGGCCCTTT CGGGCTTTGC CATCGCGCAG
GCGCAGACCT GGCTGGAGTA CCTGATGAGC GGCTCGATGG CCAGGGCCAC GATTTTGCTG
CTGGCGATTG CGGTGCTGTG CCTGCGGCCC AACGGGCTGT TCGCGATACG GTCGCGGGGT
TGA
|
|---|
| Protein sequence | MNFDIAVMQM FNGVSLFTIL LLMAIGLAIV FGLMGVINMA HGELMALGAY MTYLAARFFG
HFAPGWMDLY LFAAIPFAFA VTFAFGYLLE RGFIRFFYDR PLDTLLATWG LSLMLQQSYR
SIFGAQEVSV PLASWLAGAW EPTAGIQLPL TRIFIAGLTA VVAIGVYLLL YRTPWGLKVR
AVTQNRAIAG AVGIDTRRVD AMTFALGCGL AGIAGAVFTM IGSTNPGTGQ LYIVDAFIVV
VFGGVQSLIG TALSGFAIAQ AQTWLEYLMS GSMARATILL LAIAVLCLRP NGLFAIRSRG
|
|---|
| |