Gene Veis_4892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4892 
Symbol 
ID4695311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp5410187 
End bp5410621 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content67% 
IMG OID639852628 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_999598 
Protein GI121611791 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.310639 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTCC GCACCCTCTG CCGCGACGAA CCCGAGATCA ACCTGATCCC GTTCATCGAC 
GTGCTGCTGG TGGTCCTCAT CTTCCTGATG CTCACCACCA CCTACAGCAA GTTCACGCAA
TTGCAACTGA CGCTGCCCGT GGCCGACGCC GAGCAGCAGC GCGACCGGCC CCGGGAAGTG
ATCGTTTCCG TGGCTGCCAA TGGCCGCTAT GCGGTCAACC AGACCGGCGT CGACGGGCGC
AGCCTCGAGG CCATCGTGCA AGCGTTGCGC AGCGCCACCC CGGCCGGCCG CGACAGCGTG
CTGATCATCA GCGCCGACGC CATGGCCTCG CACCAGTCCG TGGTCACGGT GATGGAGGCC
GCGCGCCGCT TGGGCCTGGC CCAGATCACG TTTGCCACGC AGTCCTCGGC CTCGGCACGG
GCCAGCGGTC GCTGA
 
Protein sequence
MNFRTLCRDE PEINLIPFID VLLVVLIFLM LTTTYSKFTQ LQLTLPVADA EQQRDRPREV 
IVSVAANGRY AVNQTGVDGR SLEAIVQALR SATPAGRDSV LIISADAMAS HQSVVTVMEA
ARRLGLAQIT FATQSSASAR ASGR