| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4873 |
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| Symbol | |
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| ID | 4694125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 5389215 |
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| End bp | 5391329 |
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| Gene Length | 2115 bp |
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| Protein Length | 704 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639852611 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_999581 |
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| Protein GI | 121611774 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.924462 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.691601 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGAGT TTCCCGCGCA GCGCGGCACG CCGGGCTGGC TGCTGCCCGG GGCCTTGGTG
CTGCGGCTGA TGCTGGTGAC CGCGCTGGCG CTGGCTTTGT CGGGGGCGCT GGCCACATGG
CTGGTCACGC AGGCATTGGA ACGAGAGGCC GTGCGCCAAC TGGTGGGTCA GCAGACCGAT
GAGGTCGAAG TGGTCGCGCG CCTGCTGGCC AGCAAGATCG AACAAAGCCA AAAACTGCTG
CGCACCGTGG CCGAAGGCAT CACGCCGGGC ATGCTCAAGT CGCCGTCTGC GCTGGAATGG
TTGCTGCAGC AGGGACTGCC GGCGGCGCAG TTTTTCGACA CCATGCAGGT GGCCCACGCC
AGCGGCCAGG TGCGGCTGAG CCTGCGCGCA GGGCATCTGG AGCAGGCGGC CGATCTCGAC
CCCGCAGAGC GTGACGCGCT GCGCCGCACC CTCGTGGGCG GCAAGCCGCT GGTCTGCGAA
CTCATTGCCG GCGGCCGTCC GAACGAGGCG CGGGTCATGT TCACCATGCC GCTGCACCAC
ACCAATGGCA GCGTGCTGGG GGTGGTGGCA GGGGCCTTGC GGTTGCAGTC CCAAAGCCTG
CTGCCGCCAT CGATGGCCTG GCCCACGCGC GACAACTCGG AGTTCATCGT CTTCACGCGG
GACGGCACCA TCTTGTCGCA TTCCGACCCC CGCCGCATCC TGGGCCAAGT GCGCGATGAG
GCCGGGCTGG CGCCGGTCTA CGCGCGCTGG CTGGCGCAGG CCCAGCCTGT GGTGGGGCGG
GGCATCACCG ATGTGCAGCC CGATTACATC GCGAGCATGG CCGGCATGCC GCTGCCGCAG
TGGATCGTGG CGCGGGTCAG CCGCACCCAG GCGCTGCTGG CGCCCTTGCG GGATGCGCAG
CACCAAGCCT GGTGGCTGGC CATTGCGGGC ATGGCGCTGT GCCTGCTGCT GGCGCTGGCA
GCGATGGGCT GGATGGCCCA GCCCCTGGCG CAGTTGACCC ACAGGTCGCG CCACTGGCTC
CAGACCGGCA CCGGCCTGCA ACCGCTCGCA GACATGGACT GGCCGCGCGT GGACATGGTC
TGGTCGCGCG CGGGCGATGA GGTGGGCGAA CTGCTGCGCG CATTCCAGGG CCTGGCGCAG
CAGGGCCGGC GCCAGCAGAT GCGCAAGGAC CTGCTCGACG GTCAGTTGCA GGCCGTTCTG
GACAAGTCCT CGGCAGGCAT CGTCATCTCG CGCCACGGCC TGCTGGACAA GGTGAGCCGC
CAAGCCTGCC TGATGCTGGG CTATGCGGCG CACGATGAGT TGCAGGGGCG CCCCGTCAGC
AGTTTGTACG CCAGCGACGC AGACTACGCG CAGGTGGCAG ACCTGGTGCG CACCGAGATG
GTTGCGCATG GCGCATTCGA TGGCGACATC TGCCTGCGCC GCAAAAACGG CAGCCCCCTG
TGGGTGCGTG TGCAGGGACA AGGCGTTCGG CCCGACGAGT TGCGTGGCGG CATGGTCTGG
ATACTGGAGA ACATCAGCGC CGCGCGCCAG GCGCAGGTGC AGCAGTCCCG GGATCGCCGG
CATGACGCGC TGACACAATT GCCCAACCGC GCGGCCTTCG ACGAGCGGCT GGGCCTGTTG
CTGGCCCAAC GCGCGGCAGA GGGCGCGGTG CAGGGCGCAA AGGGAAATCC GCCGCCGGAC
GATGGCGTCG TGCTGTTTCT CGATCTCGAC CACTTCACCG AGGTGAACGA CATTGCCGGC
CATGACGCCG GCGACGATGT GCTGCGCCAT GTGGCGCGCC TGCTCGGAAC GCAGGTGCGC
CAGATCGGCT GGGTCGCGCG CCTGGGAGGA GACGAATTTG CCGTGGTGCT GCCCGGCTGC
GCATTGGCAC GCGGCCAGGC GGTGGCCGAA CAGTTGCGCG CCGCAGTGCA GGCCTGGGAG
CATTCCTACC AGGGCCGCCG CTTCACGCTG GGGGTGAGCA TCGGCCTGGT GGCGCTCGAT
GCCAGCTTGC AGGATGTGGC GTCGGTGCTC TACGCCGCCG ACATGGCCTG CCACGAGGCC
AAGCGCGCTG GCCGCAACCG GGTGCAGACC CGCGCAGTCA CGGCATCCGG GCGCATGACG
CTGAGGCCGG CCTGA
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| Protein sequence | MSEFPAQRGT PGWLLPGALV LRLMLVTALA LALSGALATW LVTQALEREA VRQLVGQQTD
EVEVVARLLA SKIEQSQKLL RTVAEGITPG MLKSPSALEW LLQQGLPAAQ FFDTMQVAHA
SGQVRLSLRA GHLEQAADLD PAERDALRRT LVGGKPLVCE LIAGGRPNEA RVMFTMPLHH
TNGSVLGVVA GALRLQSQSL LPPSMAWPTR DNSEFIVFTR DGTILSHSDP RRILGQVRDE
AGLAPVYARW LAQAQPVVGR GITDVQPDYI ASMAGMPLPQ WIVARVSRTQ ALLAPLRDAQ
HQAWWLAIAG MALCLLLALA AMGWMAQPLA QLTHRSRHWL QTGTGLQPLA DMDWPRVDMV
WSRAGDEVGE LLRAFQGLAQ QGRRQQMRKD LLDGQLQAVL DKSSAGIVIS RHGLLDKVSR
QACLMLGYAA HDELQGRPVS SLYASDADYA QVADLVRTEM VAHGAFDGDI CLRRKNGSPL
WVRVQGQGVR PDELRGGMVW ILENISAARQ AQVQQSRDRR HDALTQLPNR AAFDERLGLL
LAQRAAEGAV QGAKGNPPPD DGVVLFLDLD HFTEVNDIAG HDAGDDVLRH VARLLGTQVR
QIGWVARLGG DEFAVVLPGC ALARGQAVAE QLRAAVQAWE HSYQGRRFTL GVSIGLVALD
ASLQDVASVL YAADMACHEA KRAGRNRVQT RAVTASGRMT LRPA
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