| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4867 |
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| Symbol | trpA |
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| ID | 4690648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 5380742 |
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| End bp | 5381581 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639852605 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_999575 |
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| Protein GI | 121611768 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.16502 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGTA TCGAAGCCAC CTTCCGTGCG CTCGAGGACC AGGGCCGCAA GGCGCTGATT
CCCTACGTCA CCGCCGGTTT CCCGTTTGCT GACATCACGC CGGCGCTGAT GCACGGCATG
GTCGAGGCCG GCGCCGACAT CATCGAGTTG GGCGTGCCGT TCTCCGACCC GATGGCCGAT
GGCCCGGTGA TCCAGAGGGC CGGGGAAAAA GCCCTGGGAC TGGGCATTGG CATGTCGCAG
GTGTTCCACC AGGTGCGGGA ATTTCGCAAG CGCAACGGCA CCACCCCGGT GGTGCTGATG
GGCTACGCCA ACCCGGTGGA GCGCTACGAG CAGATCCATG GCCAGGGGGC GCAGCAGGGA
GCGCAGGGGG CGCAGGAAGC ATTCGTGCGC GACGCCGCCG CCGCGGGCGT CGATGGCGTG
CTGGTCGTCG ACTACCCGCC CGAAGAATGC ACCGCCTTTG CCGCCAGCCT GCGCGCACGG
GGCATGGACC TGATCTTCCT GCTGGCGCCC ACCAGCACCG CCGAGCGCAT GGCGCAGGTG
GCGCAGGTGG CCAGCGGCTA TGTGTACTAC GTCTCGCTCA AGGGCGTGAC CGGTTCGGGC
GCGCTGGACC GCAGCGCCGT CGAACAGATG CTGCCCCGCA TCCGCCAGCA TGTGCGCATC
CCCGTGGGCG TGGGTTTTGG CATCCGCGAC GCGGCCACGG CCCAGGCGAT TGGCAAGGTG
GCCGATGCCG TGATCATCGG CAGCCGCATC ATCGAGCTGA TCGAAGACCA GGAGCATGCC
AAGGTCGTCC CGGTCACGAT CGACTTTCTG CGCGGCATCC GCAAGGCGCT GGACGCATAA
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| Protein sequence | MSRIEATFRA LEDQGRKALI PYVTAGFPFA DITPALMHGM VEAGADIIEL GVPFSDPMAD
GPVIQRAGEK ALGLGIGMSQ VFHQVREFRK RNGTTPVVLM GYANPVERYE QIHGQGAQQG
AQGAQEAFVR DAAAAGVDGV LVVDYPPEEC TAFAASLRAR GMDLIFLLAP TSTAERMAQV
AQVASGYVYY VSLKGVTGSG ALDRSAVEQM LPRIRQHVRI PVGVGFGIRD AATAQAIGKV
ADAVIIGSRI IELIEDQEHA KVVPVTIDFL RGIRKALDA
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