| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4862 |
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| Symbol | |
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| ID | 4695284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 5375750 |
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| End bp | 5377552 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639852600 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_999570 |
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| Protein GI | 121611763 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.428479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.102171 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTTCT TGCGCTCCCC CTTGGTGCTC TTTGTCGCCG ACCTGGCGCT GGCGCTGCTG
GCCTGGTGGC TGGCCTTCTG GCTGCGTTTC AACCTGGACA TTCCGGAGGA ATTCGTCCAA
CTGGCCCTGG CGAGCAGCCC ATGGTGTGTG CTGGCCTACG GGGTCGGCTT CGCGTTCGCC
CGGATCGACC GCCAGGTCTG GAGCTATATC GGCCTGCCCG AGCTACGCCA ACTGGCCATC
GGCATCGTCC TGAGCGGCAC GCTGACTGCG GCGGGGGTGC TGATGCTCAG GCTGCACGCT
TTCCCGCGCT CGACCCTGCT GTTGCAGCCG CTGCTGGCCT TGGTGCTGAT GGGCGCTGCC
CGGGCGGGCT GGCGCACGTT CGCCGAGCGG CGCCTGGTGG CCCGGCAGGG CAAGCCGGTG
CTGATCCTGG GCACTTTGCC GCAGGCTTCG GACGCGCTGC GGGCGCTCAA GGGGTCCTCG
CAATGGCAGC CGGTGGGCAT TTTGTCGCCG CAACCCGACG AGGTGGGCCG CTCGCTGCAG
AGCGTGCGGG TCTGGGGCAC GCCGGCCGAG ACCGCGCGCG TGGCGCAGAC GCTGGCCGTG
CGGGCCTTGC TGGTGGCCAG CCCGCCGGGC GCATCGGGCC GGCGCGAGAT GCTGCTGCAA
GCCGCAGATA CCGGCGTGGC GCTGCTGACC TTGCCACGGC CGGACGAATG GCTCAAGAGC
GACGGCGCGG GGCCGCGCAG GCTGGAATTG GAGGATCTGC TCGGCCGCGA GTCGGTGCAG
TTGGATGTGG CCAGCCTGTC GGGCCTGCTG TCGGGGCAAA CCGTGCTGGT GACAGGCGCG
GGGGGCTCGA TCGGCGCGCA GTTGTGCCGC CAGATCGCGC GTTTCGGTGT CCGGCGGCTG
GTGTGCGTCG ACATTTGCGA ATTTGCCGTC TACCAGTTGG AGCAGGAACT GCGCGAAGCC
CACCCGCAGA TGCAAGGCTG CTACTACACC GCGAATGTGC GCGAGCCGGC GCGCCTGCTG
GCCATCGCGG ACAAGCACCG CCCGGCCGTG GTCTTTCACG CCGCTGCGTA CAAGCATGTG
CCGTTGATGG AGGAGCTCAA CGCGATCGAG GCCCTGCGCA CCAACGTGGC CGGCTCCTGG
CATGCGGCGC GCGCGGCCGG TGTTTGCGGG GCCGGGCGTT TCGTGATGAT CTCCACCGAC
AAGGCCGTCA ACCCGACCAA CGTGATGGGC GCCAGCAAGC GGCTGGCCGA GTTGATGGTG
CAAAGTGCCG CGCAGGCGTT CGCCGGCACC CATTACGTCT CGGTGCGCTT TGGCAATGTG
CTGGGTTCGA GCGGCTCGGT GGTGCCGCTG TTCACCAGGC AGATTGCCAC CGGTGGCCCG
GTCACCGTGA CGCATCCGGA CATCGTGCGC TACTTCATGA CCATTGCGGA AGCGGCGCAG
TTGGTGCTGC AAGCCGGGTT GATGGGCCGC TCGGGCCAGA TCTTCGTGAT GGACATGGGC
GAGCCGGTGA AGATCATCGA ACTGGCCCGC ATGATGATTC GTCTGTCCGG CAAGACCGAA
CTGGAGATTC CGATCAGCTA CACCGGCCTG AGGCCCGGTG AAAAATTGTT CGAGGAATTG
CTGGCCAACG ACGAATCCAG CGTGGCCACG CCGCATCCCA AACTGAGAAT CGCCAAGACC
TCCCGGCAGG GGCTGCCGGA TGTGGCGTCG GTGTTGCAAT GGATCGGGGA TGCCGATGCT
GAACCAGAGG AGGCGATACG GGCCTGGCTC CGGACGCTGG TGCCGGAGTA TCTGGTGCGC
TGA
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| Protein sequence | MHFLRSPLVL FVADLALALL AWWLAFWLRF NLDIPEEFVQ LALASSPWCV LAYGVGFAFA
RIDRQVWSYI GLPELRQLAI GIVLSGTLTA AGVLMLRLHA FPRSTLLLQP LLALVLMGAA
RAGWRTFAER RLVARQGKPV LILGTLPQAS DALRALKGSS QWQPVGILSP QPDEVGRSLQ
SVRVWGTPAE TARVAQTLAV RALLVASPPG ASGRREMLLQ AADTGVALLT LPRPDEWLKS
DGAGPRRLEL EDLLGRESVQ LDVASLSGLL SGQTVLVTGA GGSIGAQLCR QIARFGVRRL
VCVDICEFAV YQLEQELREA HPQMQGCYYT ANVREPARLL AIADKHRPAV VFHAAAYKHV
PLMEELNAIE ALRTNVAGSW HAARAAGVCG AGRFVMISTD KAVNPTNVMG ASKRLAELMV
QSAAQAFAGT HYVSVRFGNV LGSSGSVVPL FTRQIATGGP VTVTHPDIVR YFMTIAEAAQ
LVLQAGLMGR SGQIFVMDMG EPVKIIELAR MMIRLSGKTE LEIPISYTGL RPGEKLFEEL
LANDESSVAT PHPKLRIAKT SRQGLPDVAS VLQWIGDADA EPEEAIRAWL RTLVPEYLVR
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