| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4822 |
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| Symbol | |
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| ID | 4691760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 5324427 |
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| End bp | 5325614 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639852562 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_999532 |
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| Protein GI | 121611725 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.623024 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.429541 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACTC GCCGCATCGT CCTCAGCCGC AGCGCCGCCA TCGTGGGCGC CGCTGCCACA
GGCTGGTTGC TGCCGGCCAC GGCGGGCGCG CAAAGCGCCA AGCTGCGTGT GGGCCTGATG
CTGCCGTACA CCGGCACCTA CGCCCAACTC GGGGTGGCCG TCGAAAACGG TGTGCGCATG
GCCATCGACC AGCAAGGCGG CAAGCTCGGT GGGCGCGAGA TCGAGTGGTT CAAGGTCGAC
GACGAGTCCG AGCCCAGCAA GGCGGTGGAA AACGCCAGCA AACTGGTGCA GCGCGACAAG
GTGCAGGTGC TGATCGGCAC GGTGCATTCG GGCGTGCAAA TGGGCATTCA GAAGGTGGCA
CGCGAGACCG GCGTGCTCAG CCTGATCCCC AACGCCGGCG CGCATGCGGC CACCCGGGCA
TTGTGCGCCC CGAATGTGTT CCGCACCTCT TTCACCAACG CGCAGATCAC GCTGGCGCTG
GGTCCGGCGA TGGTCGCAAG AGGCCACAAA AAGGCCGTCT GGATCACCTG GAAGTACGCT
GCCGGCGAGG AAGCCTTCGA GGGTTTCAAG CAAAGCTATC CGGCTGCCGG TGGCAGCATC
ATCAAGGAAC TGGGCCTGCC CTTTCCGAAC GTCGAATTCC AGGCCCTGCT GACCGAGATC
GCGGCCTTGC AGCCCGATGC CGTGGCCTGC TTTTTTGCCG GCGGCGGCGC TGCCAAGTTC
ATCCGCGACT ACGCCGCTGC GGGTCTGAAG GACAAGATTG CGCTGTATGG CTCGGGCTTC
CTCACCGAAG GGGTGCTCGA CGCCGCAGGC CCTGCCGCCG ACGGCATCAT CACCACGATG
CACTACAGCG ACTCGCTGGA CACGCCGCGC AACAAGCAAT TTCGCATGGA GTACGCCAAG
GCTTTCCGCA GCCAGCCCGA TGTGTATGCG ATGCAGGGCT ATGACACCGG CCTGCTGCTG
GTGCACGGGG CCAATGCCGT CCAGGGCGAC ATGGAGGCCA AGCCAGCGCT GTACCGGGCG
CTGGAGAGCG CCGTGATCGA CAGCCCACGC GGCCGATGGA CCATGAGCCG CGCCCACAAC
CCGGTGCAGG ACATTTATCT GCGCCGGGTC GAGAACATGG AAAACAAGGT GATCGGCGTG
GCCGCCAAGG CCCAGGCCGA CAGTGGTGCC GGGTGCCGGA TGGGCTAA
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| Protein sequence | MSTRRIVLSR SAAIVGAAAT GWLLPATAGA QSAKLRVGLM LPYTGTYAQL GVAVENGVRM
AIDQQGGKLG GREIEWFKVD DESEPSKAVE NASKLVQRDK VQVLIGTVHS GVQMGIQKVA
RETGVLSLIP NAGAHAATRA LCAPNVFRTS FTNAQITLAL GPAMVARGHK KAVWITWKYA
AGEEAFEGFK QSYPAAGGSI IKELGLPFPN VEFQALLTEI AALQPDAVAC FFAGGGAAKF
IRDYAAAGLK DKIALYGSGF LTEGVLDAAG PAADGIITTM HYSDSLDTPR NKQFRMEYAK
AFRSQPDVYA MQGYDTGLLL VHGANAVQGD MEAKPALYRA LESAVIDSPR GRWTMSRAHN
PVQDIYLRRV ENMENKVIGV AAKAQADSGA GCRMG
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