| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4819 |
|---|
| Symbol | |
|---|
| ID | 4695209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 5321688 |
|---|
| End bp | 5322461 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639852559 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_999529 |
|---|
| Protein GI | 121611722 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.427162 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAG TGCTGCTGCG CGCGCACCAA CTGACCCGGC GCTTCGGCGG ACTGGCCGCC
GTCAATGGCG TGTCGGTGCA ACTGTGGCGC GGCTGCATAC ATGCCGTGAT CGGCCCCAAC
GGCGCCGGCA AGTCCACCCT GACCAACCTG CTCTCGGGCG AGATGCCCCC CACCTCGGGC
CAGGTGCAAC TGGGCAGCAC CGACGTGACG GGCTGGGCGC CCGAACGCAT CGCGCGCCAG
GGCCTGGGGC GCAGCTACCA GAAGGTGAAC CTCTTTTTGC CGTTCACGGT GCATGAAAAC
ATACGCTTGG CGGCCCAGTC GCGCGCTGCG CAGCAACCCT GGAACCCGCT GCATTGGTGC
GCCGATACGC GCCGGGACAC GATCAAGAAC AGGGCCATCG GCGAACGGGT CGCAAGCGTC
ATGGAGCTGG CGGGCCTGAA GGACCGGCGC AACGCCAGCG CCGGCACGCT GAGCCACGGC
GAGCAGCGGC AGTTGGAGAT CGCGATGACC CTGGCCACCG AGCCGCAGGT GCTGCTGCTC
GATGAACCCC TGGCCGGCAT GGGTGTGGCC GAGGCCGAAC GCATGGTGCA ACTGCTGCAA
GACCTCAAAC CCGCCCATGC CATCATGCTC GTGGAGCACG ACATGGATGC CGTGTTTGCG
CTCGCCGAGC AGATCACGGT GATGGTCAAT GGCCAGGTCA TCGCCCATGG CACACCGGCC
CAGGTGCGCG CCGACGCGGC GGTGCAGACC GCTTACCTCG GGCAAGACCA CTGA
|
|---|
| Protein sequence | MAEVLLRAHQ LTRRFGGLAA VNGVSVQLWR GCIHAVIGPN GAGKSTLTNL LSGEMPPTSG
QVQLGSTDVT GWAPERIARQ GLGRSYQKVN LFLPFTVHEN IRLAAQSRAA QQPWNPLHWC
ADTRRDTIKN RAIGERVASV MELAGLKDRR NASAGTLSHG EQRQLEIAMT LATEPQVLLL
DEPLAGMGVA EAERMVQLLQ DLKPAHAIML VEHDMDAVFA LAEQITVMVN GQVIAHGTPA
QVRADAAVQT AYLGQDH
|
|---|
| |