| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4815 |
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| Symbol | |
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| ID | 4692360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 5317011 |
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| End bp | 5318861 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639852555 |
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| Product | TRAP C4-dicarboxylate transport system permease DctM subunit |
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| Protein accession | YP_999525 |
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| Protein GI | 121611718 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component
[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.961579 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0807314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCCATCG GCCCGCCCGA CCGCGCCGGC CACCCGCGCG CGCTGCCCTG GCTGATAGTC
CCTCTGGAGT GGGCCTCTGC GGGGCTGATG CTGGTCATCA TGGCCCTGCT TTTGACCGCC
GTCCTGTCCC GTTATCTGTT CTCCAGCCCG ATTGTCTGGA TCGACGAGAT CGTCTCGATG
TCGTTCATCT GGCTGTGCAT GATGGGAACG GCACTGGCCA TGCACCGCAA CGAGCACCTG
CGCCTGGGCC TGTTCGTCGA CCAACTCTCT GGCACCGTGC ACGCCACGGT GCGCGCGTTC
GCGCTGTGTG CGATGCTGGC TTTTCTGATC GTCTTGCTGC CGTCGGCATG CGAATACGCA
CAGCAAGAGT GGCTCATCCG GACGCCGGCG CTGGATCTGC CCAACACATT CCGGGTGGCG
GCCATTCCCT TCGGTTTTGC CGCCATGCTG CTGATCGTGT TGGCCTACGC GGTGCGCACC
GTCCCCGCCA AGGTGCTGCT GGGAACCGCT GCCGTGGTCA TCGCCGTGGT GGCCGCTTTG
TACGGGGCGC GCCCGGCGCT GGCCGCTCTC GGCAACTGGA GCATGCTGAT CTTCCTGGTG
GGGGTGGTGC TCTTGTGCCT GCTGGCCGGG GTGCCCATCG CCTTTTGCTT TGGCCTGGGC
GCCATCGGCC AACTGGCATT CACGACGCAG GTGCCGTTGC TGATCGTGGT CGGCCGCATG
GACGAGGGCA TGTCCAGCCT GATCCTGGTG TCGGTGCCGA TCTTCGTGCT GCTCGGCTGC
ATTCTCGACG CCACCGGCAT GGGCAAGGCC ATCGTGGAGT TCCTGGGGGC ACTGATCGGG
CATCTGAAGG CCGGGATGTC GTATGTCCTG CTGGGCTCGC TGTTCATCGT CTCCGGCATC
TCCGGCTCCA AGGTCTCGGA CATGGCCACC GTCGCGCCAG CGCTGTTTCC CGAGATGAAG
CGCCGCGGGA ACAAGCCCGG CGAGATGGTG GCCTTGCTGG CCACAGGCGC AGCCATGGCC
GACACGGTGC CGCCGAGCAT TGTGCTGATC GTGCTCGGTT CCGTGGCCGG GGTGTCGATT
GCCGGGCTGT TCCAGAGCGG CTTCGTGGTG GCGCTGGTGC TGCTGCTTTC CCTGATGGCG
CTGGCACGCT GGAAGGCCAG AAACGAGCGG GCGCCGCACC GGCGCCGGGC GTCGCCGAAG
GTGATCGGGC AGAGCCTGCT GGTGGCGGCG CCGGCGCTGC TGCTGCCGTT TCTGATCCGC
AGCGCGGTCG GCGGCGGAGT GGCCACTGCG ACCGAGGTCT CGACCATCGC CGTGCTGTAC
GCGCTGCTGA CGGGGCAGGT GATGTACGGC GGCATTGGCG CGCGCAGGTT CTACGCGATG
CTGGTCGAGA CAGTCGCACT GTCCGGCGCC ATCTTGCTGA TCCTGGGCGC CGCTTCGGCG
CTGTCCTGGA CGATTACCCA AAGCGGCATC GTCCAGCAGT TGTCCCCCTG GATGACGGCC
ATTCCTGGCG GCCAGATGGC GTTCCTGGCG CTCACCATGG TGCTCTTTTT GGTGCTGGGC
TGTTTGCTCG AAGGTCTGCC GGCCGTGCTG CTGCTGGCGC CCATCATGTA TCCGATGGCC
AGAAAGCTCG GCATCCATGA TGTCCACTAC TCGATGGTGA TCGTCTGCGC GATGAACGTC
GGGCTGATGA TGCCCCCGAT AGGGGTCGGG TTCTATATTG CCTGCCGTAT CGGCGAGGTC
AAGCCGGATG AAGCCTTGCG CTCGATTTGG CCTTACCTGC TGGCCTTGCT GGCCGGGGTC
GTGGTCATTG CGGCGGTTCC GGGCATTTCC ACGCTGGCAT TGAAGGGCTG A
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| Protein sequence | MPIGPPDRAG HPRALPWLIV PLEWASAGLM LVIMALLLTA VLSRYLFSSP IVWIDEIVSM
SFIWLCMMGT ALAMHRNEHL RLGLFVDQLS GTVHATVRAF ALCAMLAFLI VLLPSACEYA
QQEWLIRTPA LDLPNTFRVA AIPFGFAAML LIVLAYAVRT VPAKVLLGTA AVVIAVVAAL
YGARPALAAL GNWSMLIFLV GVVLLCLLAG VPIAFCFGLG AIGQLAFTTQ VPLLIVVGRM
DEGMSSLILV SVPIFVLLGC ILDATGMGKA IVEFLGALIG HLKAGMSYVL LGSLFIVSGI
SGSKVSDMAT VAPALFPEMK RRGNKPGEMV ALLATGAAMA DTVPPSIVLI VLGSVAGVSI
AGLFQSGFVV ALVLLLSLMA LARWKARNER APHRRRASPK VIGQSLLVAA PALLLPFLIR
SAVGGGVATA TEVSTIAVLY ALLTGQVMYG GIGARRFYAM LVETVALSGA ILLILGAASA
LSWTITQSGI VQQLSPWMTA IPGGQMAFLA LTMVLFLVLG CLLEGLPAVL LLAPIMYPMA
RKLGIHDVHY SMVIVCAMNV GLMMPPIGVG FYIACRIGEV KPDEALRSIW PYLLALLAGV
VVIAAVPGIS TLALKG
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