Gene Veis_4805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4805 
Symbol 
ID4695133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp5305052 
End bp5306233 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content70% 
IMG OID639852545 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_999515 
Protein GI121611708 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.266068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.124363 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCC CCCTCGATGG CATCACCGTG GTAGCGCTCG AGCATGCCAT CGCCGCCCCG 
CTGTGCACGC GCCAACTCGC CGACCTGGGC GCGCGCGTCA TCAAGGTCGA GCGCCCGGGC
AGCGGCGACT TCGCCCGCGC TTATGACACG CGGGTGAACG GGATGTCCTC GCACTTCGTC
TGGACCAACC GCTCCAAAGA AAGCCTGACC CTCGATCTGA AGCACCCCGA GGCGCTGGCC
GCATTGCGCC AACTGCTGGC CCAGACCGAC GTGCTGGTGC AAAACCTGGC ACCCGGCGCC
GCTGCGCGCC TGGGGCTGTC TTACGCCGCC TTGCAGGCCG ACCATCCGCG CCTGATCGTC
TGCGACATCT CGGGCTACGG CGCCGACGGC CCGTACCGCG ACAAAAAAGC CTACGACCTG
CTGATCCAGA GCGAGGCCGG TTTCTTGTCG GTGACCGGCA GCCCGGACGC GCCCGCCAAG
GCCGGCAACT CGGTGGCCGA CATCGCCGCC GGCATGTACG CCTACAGCAG CATCCTGGCA
GCGCTGCTGC AGCGCGGCAA AACCGGGCAG GGCGCGCATA TCGACCTGTC GATGCTCGAA
GCGCTGGGCG AATGGATGGG CTACCCGATG TACTACGCCT ACCAGGGCGC AGCGCCACCG
CCGCGCGCAG GCGCCGCCCA TGCCAGCATC TACCCCTATG GGCCGTTCGC CACGGGCGAC
GGTGGCAGCG TGATGCTGGG CCTGCAAAAC GAGCGCGAGT GGCAACTGTT TTGCACGCTG
GTGCTGCAAG ATGCCCAGTG CGCCAGCGAC CCGCGCTTCG ACACCAACGC GCGGCGCAGC
GAGCACCGCG CCGCGCTGCA AGCCATCATC GAGCAAGCCT TCGCCAGCCT GGGCAGCGCG
CAGGTGATGG CGCGCCTGGA CCAGGCGCAG ATTGCCAACG CCCGCGTCAA CGACATGGCG
GGCCTGTGGG CGCACCCGCA ACTGGCCGCG CGCGGGCGCT GGCAGGACGT GCCAACGCCT
GCCGGCCAGG TGCCGGCGCT GCTGCCGCCG GGGCGCAACA ACCGGTTCGA CTACCGCATG
GACCCGGTGC CCGCCGTGGG CCAACACACC GAGGCGATAC TGCGCGCGCT CGGCCACGAC
ACCGGCAGCC TGGCCAGGCT GCGCGCGCAG GCCGCGATCT GA
 
Protein sequence
MTRPLDGITV VALEHAIAAP LCTRQLADLG ARVIKVERPG SGDFARAYDT RVNGMSSHFV 
WTNRSKESLT LDLKHPEALA ALRQLLAQTD VLVQNLAPGA AARLGLSYAA LQADHPRLIV
CDISGYGADG PYRDKKAYDL LIQSEAGFLS VTGSPDAPAK AGNSVADIAA GMYAYSSILA
ALLQRGKTGQ GAHIDLSMLE ALGEWMGYPM YYAYQGAAPP PRAGAAHASI YPYGPFATGD
GGSVMLGLQN EREWQLFCTL VLQDAQCASD PRFDTNARRS EHRAALQAII EQAFASLGSA
QVMARLDQAQ IANARVNDMA GLWAHPQLAA RGRWQDVPTP AGQVPALLPP GRNNRFDYRM
DPVPAVGQHT EAILRALGHD TGSLARLRAQ AAI