Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4801 |
Symbol | |
ID | 4691150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 5299920 |
End bp | 5300789 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 639852541 |
Product | HpcH/HpaI aldolase |
Protein accession | YP_999511 |
Protein GI | 121611704 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2301] Citrate lyase beta subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.147355 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCACG CAGGCATGGC CCCGACCGGC CCGGCGCCGG CGCTGGCCGA GGCGCGCAGC TTCCTCTTCG TGCCGGCGAA CCGCCCCGAC CGCCTGCCCA AGGCGCTGGC CAGCGGCGCC GATGCGGTGA TCATCGACCT GGAAGACGCG ATTGCGCCGC CGCAGCGCGA TGGCGCGCGC AGCGCATTGC AACCAGTCTG GGCCAGCATC GCCGCGCCGG ACCGCGCCCG GCTGGTGCTG CGGATCAACG GCGCCGGCAC GCCCTGGCAT CGAGCCGACG TGGCGCTGGC GCGCGCCTTG GTCGCCGATG GGCTGGCCGC GCTGATGCTG GCCAAGGCAG AGCAGGCGCG GGACCTGGCG GCCCTGGCCC AGGCCTGCCC TGGCGCCGCG CTGCTGCCGC TGGTCGAAAG CGCCGAGGGC GCGGCGGCGC TCGACGCGCT GGCAGCCGCC CCCCGGGTGC TGCGCCTGGC GCTGGGCGAC ATCGACTTGC AGGCCGATCT GGGCATGGCC TGCGGCCCGG AGCAGGCCGA GTTGGCCCCG CTGCGCTGGG CCATGGTGCT GGCCTCGCGC CGCGCCGCGC TGGCGCCACC GATCGATGGC GTGACGACCG CCCGGGACGA TGCAGCGGCG CTGACGCAGG ACACAGCGCG CAGCCGGCGC TTCGGTTTTG CCGCCAAGCT GTGCATCCAT CCGGCGCAGA TTGCCGTGGT CCATGCCGCA TTCGCCCCCG GCGCCCGGGA ATGCGACTGG GCCCGGCGCG TGCTGGCCGC CGCCGAGGCG GCCGGCGGCG GGGTCTGCGT GGTCGATGGC CGCATGGTCG ATGCGCCCGT CATCGCGCTG GCGCGCCAGA CCTTGCGGCG CCAGGCATGA
|
Protein sequence | MTHAGMAPTG PAPALAEARS FLFVPANRPD RLPKALASGA DAVIIDLEDA IAPPQRDGAR SALQPVWASI AAPDRARLVL RINGAGTPWH RADVALARAL VADGLAALML AKAEQARDLA ALAQACPGAA LLPLVESAEG AAALDALAAA PRVLRLALGD IDLQADLGMA CGPEQAELAP LRWAMVLASR RAALAPPIDG VTTARDDAAA LTQDTARSRR FGFAAKLCIH PAQIAVVHAA FAPGARECDW ARRVLAAAEA AGGGVCVVDG RMVDAPVIAL ARQTLRRQA
|
| |