Gene Veis_4793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4793 
Symbol 
ID4694410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp5293184 
End bp5293714 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content69% 
IMG OID639852533 
ProductNusB antitermination factor 
Protein accessionYP_999503 
Protein GI121611696 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00602404 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0313462 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGA ACCACGACGC CGCGCCGGCT GACGCTCGAC CGCCCCCGGC AGCGCGCGCC 
AAGGCCATCG GCGGGCGCGG GCCGGGCGCG CGCCTGCCCC GCAGCCGCGC GCGCGAATTC
GCGCTGCAGG CGCTGTACCA GCACCTGGTG GGCGGCAACG ATGCGGCGGA CATCGACGAA
TTCACGCGCG GCCTGGCCGG TTTTCACAAG GCCGATGCGG CGCATTACCA GACCCTGCTG
CATGGCTGCA TCGGCGCGGC AGCGGACATC GATGCGCTGA TCGTCCCGCT GCTGGACCGC
CAGTTGATCG CCATCTCGCC GATAGAGCGC GCCACGATGT GGATCGGCGT GTACGAATTT
CAGCATTGCC CGGACGTGCC CTGGCGCGTG GTGCTCAATG AATGCATCGA ACTGGCCAAG
GAATTTGGCG GCACCGACGG CCACAAGTAC GTCAACGCCA TGCTCAACGC TCTGGCGCCG
CGTCTGCGCG CCGCCGAAGT GGCGGCCGAC AGGGCCAGGG CAGCGCCCTG A
 
Protein sequence
MSTNHDAAPA DARPPPAARA KAIGGRGPGA RLPRSRAREF ALQALYQHLV GGNDAADIDE 
FTRGLAGFHK ADAAHYQTLL HGCIGAAADI DALIVPLLDR QLIAISPIER ATMWIGVYEF
QHCPDVPWRV VLNECIELAK EFGGTDGHKY VNAMLNALAP RLRAAEVAAD RARAAP