Gene Veis_4792 details

Gene Information

• Locus tag: Veis_4792
• Symbol: ribH
• ID: 4694008
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Verminephrobacter eiseniae EF01-2
• Kingdom: Bacteria
• Replicon accession: NC_008786
• Strand: +
• Start bp: 5292723
• End bp: 5293187
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 639852532
• Product: 6,7-dimethyl-8-ribityllumazine synthase
• Protein accession: YP_999502
• Protein GI: 121611695
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0054] Riboflavin synthase beta-chain
• TIGRFAM ID: [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00226063
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: 5
• Fosmid unclonability p-value: 0.0320166
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTTCGGCG CAGACAAAGG CACGGCAGAC CGGCTCGACG GCAAGAAACT GCACATCGGC 
ATCGTGCAAG CCCGCTTCAA CAGCGGCATC ACCAACGCGC TGGCAGCGGC CTGCTGCGCC 
GAACTGCTGG CGCTGGGCGT GCAAGACAAG CACATCATGC AGGTGCAGGT GCCCGGCGCG 
CTCGAAATCC CCGTGGCCCT GCAAGCCATG GCCGAGCGCA ACCACTACGA CGCGCTGATC 
GCGCTGGGCT GCATCATCCG TGGCCAGACC TACCACTTCG AGCTGGTGGC CAACGAATCG 
GGCGCCGGCG TGACGCGGCT GGCGCTCGAC TACCAAATCC CGATCGCCAA CGCCATCATC 
ACCGTCGAGA ACCTCGAGCA GGCCATTGCC CGCCAGAGCG AAAAGGGCGC CGACGCCGCC 
CGCGTGGCGG TGGAAATGGC CAATTTGCTG GACGCGCTGT CATGA 

 

Protein sequence

MFGADKGTAD RLDGKKLHIG IVQARFNSGI TNALAAACCA ELLALGVQDK HIMQVQVPGA 
LEIPVALQAM AERNHYDALI ALGCIIRGQT YHFELVANES GAGVTRLALD YQIPIANAII 
TVENLEQAIA RQSEKGADAA RVAVEMANLL DALS